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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE32657
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFRQYHQK FQSKSESLPA RFKRAAPDKS PVTEVISRHL AIGRVLNAIY LQMQLDNGTI  60
   61 TQKDILAGIW NLKNSSVIDK LVGLTDDGIK SNIIDLEKSI DAVSGGIGAI NGVERLLDED 120
  121 GIWMEVTKSL RQKLKDGLDK IKVLQSLVDE TNSKTLQYFV EDFEVTILEK LVSFETVTFN 180
  181 QMSIRDLVYS IENFMFLSTT ISPVLKTISQ STHFKMNALL EGINATAEIY ENASEIGMLN 240
  241 PMFQNIKIQA QKFQSLLASP ETIEKLLSRL KDLKDSWVRT VLNKGMDLDD LKAYLVDFLT 300
  301 SANSLEKVNK DSVPMFNSSV IESLDYTLAL INSLRVIKKV PKDMFLTDFN SCFKVLSSTS 360
  361 IVDYNETELF ETSVVELFKT PPKVMADLET LSQDEDFSKS IYKFKDDLNN MRTEAEFATW 420
  421 KSRGSLKAMK EYFEGHRKLF KSLKQETSFI ESVNVLLRSK QKITEISSWM ANAKLGTPAC 480
  481 DFLFELDASM IQEVNRMSSR ISRIRTKNDF ENVKSLVNAV LDSTKSLKTI PNLNGNSSNS 540
  541 TRRRRSPTKK FNGDPKKLLN FAFAAHSFYQ IGQIKKYSAD LDLLIKKIPS VPDEIKKIKN 600
  601 PKVKTDLEMI WKNSASFVKF LINLKASNKR ILNLVKSKPE KTLEEVGLQY KLFSSAALTG 660
  661 KFELRKLRES MKLLDTPMDD VEDALKTLED SASMDWNLVF SNFKTIPTDL EDIQKQLLDF 720
  721 FEGEHLDDEV EGWKLAVYIG AGVLALVLIG VGAAVFAYWW ILIRDPDMRS MVPKEKIYTA 780
  781 PEEVDYSYMQ LQDSRLESNS RFGEGYGTKI FDLCERKQWE KVEKMVKAGA LLDVCNGLDG 840
  841 KTCLHVAIEN LHKETIELMI QSGADKYAHD YYGNDAVDFV KILRKDSDLF DDVYRAVKDT 900
  901 PFNTRLIPPN SKRFWNVLVF DKNALTRRQK KKLPLRIKYC ITWGYKENMD LNSFSHIVLP 960
  961 KKYVTNMNDQ KNLLAMDNND LMTFKLLACM ASLVVPSWLT ALIDPQFGEN AMDTDYKWYT1020
 1021 VHTCHNGNVH IDTVFHSKTN QHKMRPKLLE QCGFHILETE LLKNREGWEE VIKLFGGSVV1080
 1081 QDIEADDEKT PKPYWTLSSF YKKKKWEQRS CIILKHSDSK IEKKWQSMHA MYTLVDFSFL1140
 1141 AECIVRHYIL PIDNAVVPLD RIASDKEVVR KREKKKKEEE DRIARALKTE PTEEEPTDPE1200
 1201 DLIVYDPRKQ YKPMKGKKKV HPMKIKKKAP KKKKEGTLTE TTKSSMMTDM Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle