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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE32643
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSILIQSGL KHTARSHENL LPGSPRGKPI RLSHLITSLQ FSNLLGCFLA FISKVSLLLK  60
   61 SIDFTVFRRK AGLISDMVDA AAPAKAEMLA AARKKLKDFE ARQRLDGRNS PASSIISSEP 120
  121 GAGAGLNGRS SVVSEDSTAL QIPHSSSSAQ SLNARNGLDA SPFQPNGNEW YQAYTQLKTQ 180
  181 HDELCAHYSQ LHSAYSQVNA NGIHVDTENQ IVQLQNALSA MVEEKVSSQS DLRQANKQIE 240
  241 KLRHKLAAAE NIANQMSNST SSGLSSNEIR KLNEAIAQKD SLLTARHQEL EGARREVASM 300
  301 QANLLNVQHE RSEAQARVKS MIKETAAQEN RISQLMKDIQ MKDLYLKQLG ATGPPGGIPN 360
  361 ENTNYENLQR ELENVKAEKS RLLVESATLK AHYADREYAL QQKQAEMALE IEHLHNQKFS 420
  421 SNDQVEHLEN QLEIAQSELQ KLQMNMDVSE RHDEIPTITE EDVARRIREA CFVERGKWER 480
  481 RSEDDQKRRE EEILEKDKVI FEREQSLAEL EMKYRLLEER TLESTANGAD LLSLSEQLQN 540
  541 EKATVSRAVA QNKELKERLL ETEDRFVTLT KEKADVELAK QSAEHQVREL TKQLNLETAG 600
  601 LVGNLSEVIA RQPHLEASQE SAASQEQREE SQEIVKLNEE LKENISTLQR ENAEIRSDLE 660
  661 LKTHELQLVR ADLRRSNTHN EQMDEIMRQN AEDENQNSIH VELTQAVGRV QDLHAENEAL 720
  721 REAFNNCRQQ LEDERADRRA EEERKDLESK QEQLELKETK VPEEAENQQS SRELHEDLWA 780
  781 RKELEKRFAR AMLQNAELVE TIDRLEHINQ QLELENDTIA DHVVLYQHQR KLVRERLRVK 840
  841 DEQLKAMEED RTKTVARCQE LQNVLMTVLN KGGVLKEYQT SSISRKAARR VSRSYSHSTV 900
  901 DEMSGDEDVL VDAKLEEVPE REKVHGNSDD EKIPSTPPPT VLEAQNSPRL SDCSADKDNS 960
  961 DTFGQTQDAS VRRILEIISD ISRPQILPAG QLHCTQCIGD LQEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle