YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE32642
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDELAEARG EGSGRKREFH SRTNALDTLK EIDLSGKTYA ITGTTSGIGI ETARALALKG  60
   61 AHVVMFNRNI VESEKLKKRI EEEKPDVKID FISCDLNSLQ SAKAAADEFL SKHWPLHGLI 120
  121 LNAGVFAPTV KFTFDNFESH FGVNHLAQFL LAKELLPALR QSSPARIVFV SSVSSSHTGL 180
  181 KAEMTRSEKL NKLCPENANE FYYKLYAYSK MCQVLTAFKI HRDEFVSHGI STYAIHPGTM 240
  241 IGTGIILFQF HIALHTN

Type	Start	End	Confidence
Cytoplasmic	1	231	0.53
Transmembrane Helix	232	253	0.75
Non-Cytoplasmic	254	257	0.62