YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE32613
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKQGAWNSL WNFGVSLAKI FRIIKFNLLS RLFLPLIITF FLQIFNFRFT MAMANRQNRG  60
   61 AKLPPEVNRI LYIKNLPYKI TTEEMYEIFG KFGAVRQIRV GNTAETRGTA FVVYEDIFDA 120
  121 KTACEHLSGY NVSNRYLVVL YYQATKAWKR MDTEKARTKL EDIKERYGIG GDIDKEKEKL 180
  181 GLFTPRRI

Type	Start	End	Confidence
Cytoplasmic	1	27	0.58
Transmembrane Helix	28	47	0.83
Non-Cytoplasmic	48	188	0.62