YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE32602
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANWPRVSPL AYVALGVLLG LTISIISQTG TTTYDAASRI AILRANRGDP QVDEHDHAHG  60
   61 NDPHGDEEVD DHHANFAPVQ FHSNNSSHSH DGESLIADEV AKKVRVFCWI LTGKQNHDKR 120
  121 AKHVKATWAK RCNKYVFMSS EEDAELPAIN LNVSEGRDYL WAKTKGAFKY IYDHHLNDYD 180
  181 WFLKADDDTY VVMENLRFML LAHSPDEPIH FGCKFKPFTQ GGYHSGGAGY VLSREALKKF 240
  241 IEVALPDKSL CSQNHGGAED AEMGKCLEKV GVKAGDSRDA DGHHRFMPFV PEHHLSPGHV 300
  301 DPKFWFWQYT YYPMDQGPTC CSDYAVSFHY VNPNLMYVLE YLIYHLKPFG IDRAIRVPKN 360
  361 ETIIHTAYSI SRSERGQDDA FRDRPEVAV

Type	Start	End	Confidence
Signal Peptide	1	27	0.85
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	389	0.98