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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE32511
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGHRLARWR WARSYTTAVA NADVVVCGGG ISGTSIAYHL AKRGKKVALV EKDSIGCSGA  60
   61 TGLSAGLVSS PIFWQDTSLQ AIAQASLDLY SHLATTCKFR YIKCGRTYLA SSMANEILLR 120
  121 RMYSRGVVHN DKVELLDCQS EMLERWPFLQ TEDVQLALFS PEDVALDPVA LCQHLALIAK 180
  181 DYGALIYESN PVLEVHIGDE KQVYGVSTKM GFIETSHFVD AAGIWAGSHL VKALPHQHVQ 240
  241 TAAYPCTYSY IHTSKLPTGS VSDMTPIFND LDGNVMLRTT SFKTLCAGFA EESIRPLARQ 300
  301 TGSATPWQHP EPDWNTFDPN LEKLISRCPM LGDCNHGDLI VGMEAYTPDK LPTIGESSQA 360
  361 KGYWVMCGMN GQGLSLAGGL GKILGELMCE SQSSTADVAR VDVGRFIDLH ANNQYLIGRT 420
  421 PEVAALTYSN LYHSHQCHTA RNLRMAPIYH QLRDAGAVFG EIMGYERPLW FEKTPKTERN 480
  481 ALMSGQDALI GKPEWFERVA SEYEACRERV GLMDMSSFSK YDITGEDAVE YLQFLCSANV 540
  541 DEPIGTTVYT GMQHQKGGYV TDCTLSRLGE KKFFMVAPTI QQERVLVWMK KWQAILKARV 600
  601 HVQDVTGAYT ALDLIGPSSR YLMGDITGLS MSSNDFPTFR CQEINIGMAT GIRAISVTHC 660
  661 GELGWVIYVP NEVAQNVYEK ILDAGKEYSL QHAGYYTLRQ LRIEKFYVYW GQDINATVTP 720
  721 VECGRLFRVD FKKDFIGKKA LEEQVERGVS KRFVQLLVDG HDKETDPWPQ GGETILKDGR 780
  781 AVGLTTSAAY GFTLGCQVCI GYVENKEFGV SPEFVSSGHF EIDIAGKRFT CRLNVHSPSL 840
  841 PMISSEHPLH YRPTQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle