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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE32506
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.83
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNRKKGNG GTRSSSHNNS RSMMLSLFML LAHLDPAIAG SDRRSYHPNP DAEPYGIVQP  60
   61 AYPYDPHPLS VPESLVQSPR AILCNNQTEY ECVCMRPYSS PHSPVRPTPA APDCSVFIKT 120
  121 DDLPVVDMRM RQVNTEAKLY TGDSYEEYFK RRISTIVSHY CQHNANECPG VTLRMSHVSQ 180
  181 VLHVFFFFFP FLSQVAKAFH LEKALKLLKL AEQRHARLYS IDLQKINHLT HVFVVEMLQK 240
  241 LSDEEADELD LDRSVVYAER DESDPLFTKE NVVILRMDHL KGNLTRLLFV LTKNDRNNGV 300
  301 VNEDTIIDPI KIKYIIASQV GPLSRVLGGI KIDSVRTAKM KRNYAVPAAG ALSYITPEQR 360
  361 LDNQKSNKTL ITIVCAIATF FAATYCIALI QCFRWVRRKS KAKREAKLAE TSHVASVDAK 420
  421 NYGTCESQKR KPSRNGHMVH AEETIPLTYG QIDEIPDDNS QSLPQRQMRN WFKCDASQLP 480
  481 REPTYPTNFV DSYQHQPAAT TTTPKPTDDL KGSKEESPIL TKRTENNGNL HKNVSPVLSS 540
  541 QATTSSEAIF PPSKDFSDYV EDQYHKSRAS SSSPTDEIPK SPIEDPWDDA SGKYAPPMVL 600
  601 LQSDTPDLPL VMQNHTGKRY EEDEVDTDLK GLRSGGSPVF ARPRSRRGSR IDEMEGQLDI 660
  661 PELKPLRSDD PLAEPLDAPV PINSIKGSVD EEDRWSSSEE GEVDVYYKMS DDEDVTREEL 720
  721 DWKKAMAKAE LVKEAESQGR MLPGSEDQQD LKDLNKKRTE TPPSSPIQNH IQNHLNHNTE 780
  781 SDSEEEEEPA RVQDDGKDAE IAEKDDDFVY ERLREELSPQ PPIVVDLDTD LDFVPMKSLP 840
  841 PPPPGMFPDS PPESGSGSNN QMHHQRSQEM SEEDEDDLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle