YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	coq-2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITRSIGIAR RSNSINCIVG SNTSTSYSLD ESTKRWISTS TKQPMSLIPT ASSLVASSPP  60
   61 NLKPYLQLMR VDKPIGTWLL YWPCTWSIAM ATPAGQLPSI YMLSLFGAGA FLMRSAGCVI 120
  121 NDLWDKDFDK KVERTKLRPL ACGSLTEKQA IGLLAGLLSS SLAILLQLNW YSVAVGASSM 180
  181 ALVVGYPLAK RFTYWPQFVL G

Type	Start	End	Confidence
Cytoplasmic	1	77	0.92
Transmembrane Helix	78	95	0.88
Non-Cytoplasmic	96	101	0.61
Transmembrane Helix	102	124	0.75
Cytoplasmic	125	144	0.80
Transmembrane Helix	145	166	0.63
Non-Cytoplasmic	167	169	0.53
Transmembrane Helix	170	189	0.84
Cytoplasmic	190	201	0.64