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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: psf-1
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGARRDNRR SNGRDDSSRV AKAENDRKPG RENRGGDEKR GNSNNAARSG GGGGGNRGGA  60
   61 ERGIAPAQQP YDNNGGHRSG GGGGRSGGGG TSFNGAAFTE SQLMDEVPKK KFTGRCRLFV 120
  121 GNLPNEVKET ELKELFSPHG DIAECYLSGK GFAFLRLDTR AHAESAKEAI DGRIIHGRQV 180
  181 RVRFAVHGAA IRVKELSPTV SNEMLYHAFS HFGDVERAVH IVDEKGRPTG EGIVEFERKP 240
  241 NCNEAMAAIR DKVFLLTASP KPLICEVLEP RDEDDGLAER MIPRTPGLSK ERELGPRFPT 300
  301 PNSFEYVYGM KWKELYVVEQ KRRAQLDEEL RESRRRLESD MELAYQDYQA QMLREGYLMF 360
  361 FLLFFWFRAL FFFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle