YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE32291
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	88	0.97
Transmembrane Helix	89	111	0.85
Non-Cytoplasmic	112	118	0.82
Transmembrane Helix	119	140	0.91
Cytoplasmic	141	150	0.85
Transmembrane Helix	151	172	0.90
Non-Cytoplasmic	173	179	0.61
Transmembrane Helix	180	200	0.88
Cytoplasmic	201	208	0.86
Transmembrane Helix	209	230	0.91
Non-Cytoplasmic	231	237	0.76
Transmembrane Helix	238	257	0.97
Cytoplasmic	258	319	0.98
Transmembrane Helix	320	343	0.86
Non-Cytoplasmic	344	374	0.95
Transmembrane Helix	375	396	0.87
Cytoplasmic	397	401	0.87
Transmembrane Helix	402	420	0.86
Non-Cytoplasmic	421	425	0.61
Transmembrane Helix	426	447	0.78
Cytoplasmic	448	456	0.66
Transmembrane Helix	457	478	0.88
Non-Cytoplasmic	479	487	0.65
Transmembrane Helix	488	509	0.91
Cytoplasmic	510	520	0.79

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDKAILTEV LEASNLTEAY VDLTAKQLIK EIRHVGDDFA VRYSNLDDRT ELGEPTDQRS  60
   61 PDSEKTFTVD EAVEALGFGR FQLKLSILTG MAWMADAMEM MLLSLISPAL ACEWGISSVQ 120
  121 QALVTTCVFS GMMLSSTFWG KICDRFGRRK GLTFSTLVAC IMGVISGMSP HFYVLLFFRG 180
  181 LTGFGIGGVP QSVTLYAEFL PTAQRAKCVV LIESFWAIGA VFEALLAYFV MESFGWRALM 240
  241 FLSSLPLGIF AVASFWLPES ARFDMASGHP ERALETLQAA ARMNRVQLPT GRLVSSTKAG 300
  301 SESRGDIANL LSPDLRKTTI LLWCIWAITA FSYYGMVLFT TVLFQSHDEC HGGLFSNGTQ 360
  361 MEVCQPLTRS DYFDLLSTTL AEFPGLIITV LIIEWFGRKK TMALEYAVFA IFTFLLYFCL 420
  421 DRFTVTVLIF VARAFISGAF QCAYVYTPEV YPTTLRAVGL GTCSAMARIG AIVTPFIAQV 480
  481 ASEKSLSLPI GIYGTAAILG LIASLSLPIE TKGRQMMDSH