YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE32243
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLKFLILG IFISIGFVLN IVGVVAPCFM VEKATADSKQ HKCHAVNPFS SMGSSYDFAS  60
   61 FALYTTVVCQ FMVALMYGFI VYETKIKKRQ YSKEILSLFY YFKWFFLLIV VLIALSFVLI 120
  121 AIKFQSRFND NTVYLSYQSL LLITTIIVCS INIALSRRLV VQVARTIRQN STHTANPFNF 180
  181 DTTSVYSISK N

Type	Start	End	Confidence
Cytoplasmic	1	6	0.93
Transmembrane Helix	7	29	0.91
Non-Cytoplasmic	30	59	0.94
Transmembrane Helix	60	81	0.95
Cytoplasmic	82	99	0.95
Transmembrane Helix	100	122	0.93
Non-Cytoplasmic	123	134	0.88
Transmembrane Helix	135	156	0.88
Cytoplasmic	157	191	0.94