YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE32095
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWVVGACFLG LLAYILPDWR YLMFCISVPN IFVALLIYMT VPESLHFLVS SQQNEKIEAW  60
   61 LEKIRGPKGD ISASDIVEDR DENGSSFKTL CREMWKHKMF IVYVLVMTYI WIVDTFIYFG 120
  121 LAFYSTNLAG NLYLNFVLMS LVEAPAYIFS PIFMNKYGRK VLISGTHIIA GLSFLGIVLS 180
  181 SEAWHIHFWL LGKFAISCSF MSIYMFASEI FPTDGRNKCI GFCETLSRFG GMLSPYLSHL 240
  241 TAVHALAPAI TLSLIAVSGG LLTLILPETL NTKLPSTIAE TASRRQLIDD KSDSSSN

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.91
Transmembrane Helix	19	41	0.88
Cytoplasmic	42	99	0.94
Transmembrane Helix	100	122	0.91
Non-Cytoplasmic	123	131	0.75
Transmembrane Helix	132	153	0.87
Cytoplasmic	154	160	0.81
Transmembrane Helix	161	180	0.91
Non-Cytoplasmic	181	188	0.56
Transmembrane Helix	189	208	0.79
Cytoplasmic	209	224	0.60
Transmembrane Helix	225	239	0.39
Non-Cytoplasmic	240	241	0.42
Transmembrane Helix	242	266	0.84
Cytoplasmic	267	297	0.61