YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sfxn-1.3
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDLVINQKI LPDISKSKWD LDTYSGRVKH YFASANPMTL FTSSNTQEMC RKIVVDYKKG  60
   61 IINPELTMDE LWSAKILYDS VYHPDTGEKM FCLGRMSAQT PANMVITGML LSCYRTCPGI 120
  121 IFSHWINQSF NAIVNYTNRS GNCRTTNQQL LYSYFCATGA ATTAALGLNM MVKNSHGLAG 180
  181 RLVPFVAVAV ANAINIPMRT F

Type	Start	End	Confidence
Cytoplasmic	1	104	0.87
Transmembrane Helix	105	126	0.56
Non-Cytoplasmic	127	149	0.70
Transmembrane Helix	150	170	0.84
Cytoplasmic	171	177	0.54
Transmembrane Helix	178	198	0.82
Non-Cytoplasmic	199	201	0.55