YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE31741
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	6	0.90
Transmembrane Helix	7	25	0.85
Non-Cytoplasmic	26	66	0.92
Transmembrane Helix	67	88	0.90
Cytoplasmic	89	98	0.72
Transmembrane Helix	99	120	0.87
Non-Cytoplasmic	121	127	0.78
Transmembrane Helix	128	152	0.86
Cytoplasmic	153	161	0.91
Transmembrane Helix	162	183	0.91
Non-Cytoplasmic	184	190	0.76
Transmembrane Helix	191	212	0.94
Cytoplasmic	213	255	0.97
Transmembrane Helix	256	275	0.95
Non-Cytoplasmic	276	293	0.92
Transmembrane Helix	294	316	0.90
Cytoplasmic	317	323	0.90
Transmembrane Helix	324	344	0.93
Non-Cytoplasmic	345	349	0.83
Transmembrane Helix	350	371	0.91
Cytoplasmic	372	382	0.86
Transmembrane Helix	383	402	0.95
Non-Cytoplasmic	403	411	0.80
Transmembrane Helix	412	433	0.89
Cytoplasmic	434	469	0.94

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRYLRMLGM EIPLFLYMLG SYLNYPVFQN LIYEKECLIK YQQNETFCRN VSAYYDDKDI  60
   61 QAAANHFYFI SSLTLLCPSL VTTLLLGAAT DYWSIKIPLI IPYIGCILGT INYVFQSYFI 120
  121 HTSVYFLLIS DALFGLCGGF IAIISTTLTY GVKTSMLRYR SYRIAGVEGA IGLGGTVGFA 180
  181 LSGTIREACG YAVTFLIILG LQLLALLYLL GLAKETKFEP VRPDEHTSLI STTGKQLVAV 240
  241 IREFYRVITK SRQFRLLLIL NLLAFGLEML VFSGLSDIQY SYLRYKLQWG DKKYGWFSGL 300
  301 SYGITTAAVL FLYPLLRMKL MSDGMLATLG LFFKMISLFM FAFLQNEVMA YSIAVIVMFN 360
  361 RFVSTGFRAF ISSLIDMQEQ GKIFSVISLL EGITTLVATS IYNNVYPNTL TFFPGLLYLI 420
  421 SAVTLLIPLA IVSTSDFVVR THRPEVSEGI LNSRNDVIDE DGSIEDLSY