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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-83
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVMDSFSEV EMPNDISSED HLLKVIESSA EEVDIFLENC SSLYNLILDS LHNLTSKTIS  60
   61 CECLDEMTST LEKSAKKILA ERPEAENSVL LRLNTICCAM DQLRVQHNSR MMSGADSDTA 120
  121 SSARSSTSSS TGEMRLWLHE VERRLEINEK RIRVEPNLQL LLSDQQALQL EIQHEGQLLV 180
  181 NRLNKQIKDD HDSDSSEEEK RKTCVDAIRK RWHTIYLNSL SLVCRIEELI NHQQASEDSE 240
  241 SDPDLVGPPI KRARIRTVGH LTASDTEESE ADEEDRHSQT ETVVTEDDNV LPFAENEYES 300
  301 IMDGRVTVDS CTSSSEDQMV EQSTNKKWES VLQDVGYSSG ENSIHEALNT CADHLVPETS 360
  361 DMRRKRIECS PVKAFYRTVQ LEDMSDLEVT KAINHDVEEE PNLSDSMYVN HDSTFLATQN 420
  421 LPEYDEVMAL MDDDDLPMDM SMTESFNTKW REIHGQKKPL RRASRPSREQ MNLIAKSSCD 480
  481 ASSEDSSEGE NQTNLEDDPE MMSVSFNSAQ FDTSSPLKRQ RSARGLKNAS FLYDSLEMDG 540
  541 SFCSTRSEML PPCKTRSLAR RKLRVRRMPR SMSDGEQLGV VSSKPEGMMT PMIRVSPPST 600
  601 PVRRLLRKLD EQIRNRDSDT APEHSDAAQA YEWDEYNPPQ KDDSISDRHI QTMTDISDQL 660
  661 MNIDDDFAEH FGTSSAIRLI EESKSHLRVV LKALEESDSN IPQLSNFELI ARSNLRQVDE 720
  721 ALKIQSGNQP SFLETSTLQD LRSEWANLYE SIRSPFARIM HQVKKFAATL QEVSSMASLG 780
  781 DVDIRSKEDV AKTLDAVTAI ERRLSSERQE LRDLLASSSF RDVAKDLSCE FESVSEGYDD 840
  841 AVDKIGKMAH SLSQVKGEWD AWNSRQNDIR NAMVRIESHL KEGQMDNKMI ADEMELCQER 900
  901 MNSLETMCNY LTASLGSIQN ESNSKNLPDF KAELSIYSNA LARLKDRFND MIRVPTPPTV 960
  961 QFHPPEPLPS LARSMTTQTA EMESETENEP LTIAEAISSS RLIKFTFALS LLAALAAIFY1020
 1021 YHVFGKPFGP HVTYVNGPPP V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle