YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE31243
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEFFSLFE NPIALSHVRS PTNKMAKLSK ENLLLLFTVL GVVVGIGLGF SLRDPSKAWS  60
   61 KRHLSYLRFP GDLFVQMLKM LILPMIMSSI ITSLASLDSG TAGRLGMVSM IYYTLTTFFA 120
  121 VFLGIVLVSV IKPGKWTTTN IEDLVGHVKT TPCVATAVDT IIDLMKSCFP ENLIEATFRS 180
  181 QKICLKFFNG TTEIPPEIAM TMSPEQRAQF TEVPEKIVSD GMNILGLVVF SVALGIVIGV 240
  241 IGEDGKPMKN FFKSLEACSM KLIGWVIIYS PVGITFLIAA QIVGMKDPGQ ELHRLMGYVI 300
  301 TVILGLLIHA FVVIPLLCVV LARRNPIKFV GGMAQALLTA LATSSSSATL PLSIKCCEEN 360
  361 NKVDPRVTRF VLPLGATINM DGTALYEAVA AIYISQCYGN DLSLGEVVLV SLTATLASIG 420
  421 AAGIPQAGIV TMIMVLIAIG LPTNLFILIF PVDFMLDRLR TTVNVHGDSI ATAVIERLCE 480
  481 DQLQKGGHHL DTNDQGYSML STNASPDPKR ITIGNNCENS HML

Type	Start	End	Confidence
Cytoplasmic	1	32	0.92
Transmembrane Helix	33	52	0.95
Non-Cytoplasmic	53	74	0.88
Transmembrane Helix	75	97	0.86
Cytoplasmic	98	109	0.74
Transmembrane Helix	110	131	0.92
Non-Cytoplasmic	132	221	0.93
Transmembrane Helix	222	242	0.93
Cytoplasmic	243	261	0.90
Transmembrane Helix	262	283	0.94
Non-Cytoplasmic	284	297	0.83
Transmembrane Helix	298	321	0.90
Cytoplasmic	322	401	0.59
Transmembrane Helix	402	424	0.72
Non-Cytoplasmic	425	428	0.62
Transmembrane Helix	429	450	0.90
Cytoplasmic	451	523	0.83