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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lam-3
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLWLGLLAV SNIALGGWNT SEDASIWENY VEDSNYHEFI SSESERGLFP NIFNLATNSL  60
   61 ITATDTCGQY TAEEYCKLVE HVLLRKTTNT QSPQCDICDA NNVHKRHPIE YAIDGTRRWW 120
  121 QSPSLANGLR FEKVNITIDL RQEYQVAYII LKMGNSPRPG TWVLEKSLDG EYYEPWQYYA 180
  181 MQDAECMRQF GIPATTGVPR FQKEDEVHCT SEYSKITPLE NGEIHTSLVN GRPGAENTSL 240
  241 ELQKFTRARF VRLRLISPRT LNADLMIINK KSDSLDKSVT MRYFYSISDI SIGGQCICYG 300
  301 HAESCPSDPV TGQFKCECRH NTCGESCNRC CPLFNQLPWK PGTNSHPNVC QQCQCFNHAH 360
  361 SCVYDDELDR NKWSITPEGV YEGGGRCLEC AHNTEGFNCE RCKDGYYRPS GLSHYREDAC 420
  421 RTCECDPVGS VSDACVRDDQ SAENGQKPGD CICKPGFGGR RCERCAPGYR NHPTCEPCPC 480
  481 NRAGSVNFDT CDGASCQCKA NVEGIYCDRC KAGTIHLSAS NPLGCQPCFC FGHSSTCTQG 540
  541 KWNKAQIINN IGWHLTDLTG GKDVKPEVEN GEVLMFNANQ NQDRSLYYWK APDSFKGNML 600
  601 NSYGGYLHYD VYYVPTEQGA TVFVADVAIE GNGIKIEYHS RIEFLPREKM TVAIPMSELS 660
  661 GWYNAEARSP VDKADMMRAL ANVDRFTVRA TYHQPQLQSS IFGLSLDTAV PAPDEIVEED 720
  721 TSLKALAYHT QDTLMGGVEV CECPENFAGN SCESCVPGYR RVNNQLYGGR CEKCDCHGNS 780
  781 EECDPFTGEC LNCRHNTTGS RCELCKPGHV GNPSRGGELG ACEQCECPSL DLNPNPECIS 840
  841 TELAVLGSVA SNEDNYVCIN CPLGYEGNKC EYCSDGFFED PLTGKCIECT CNGNIDPMGI 900
  901 GNCDSETGKC LKCIGHTTGD SCESCKEHHW GNAQLHTCKP CGCHTQGAVN PQCSEENGEC 960
  961 ECKENYIGAQ CDRCKENHGD VENGCPACDC NDTGSIGSDC DQVSGQCNCK QGVFGKQCDQ1020
 1021 CRPSYFNFTD AGCQFCHCNI YGSIEDGKCD QTTGKCECRE NVEGTMCEKC ADGYFNITSG1080
 1081 DGCEDCGCDP TGSEDVSCNL VTGQCVCKPG VTGLKCDSCL PNFYGLTSEG CTECEPCPAP1140
 1141 GQVCDPIDGS CVCPPNTVGE MCENCTTNAW DYHPLNGCKL CDCSDIGSDG GMCNTFTGQC1200
 1201 KCKAAYVGLK CDLCTHGFFN FPTCEPCGCN AAGTDPLQCK DGQCLCNEIG ECPCKKNVHG1260
 1261 TKCDQCGEGT FSLDSSNLKG CTECFCFNRT SNCEQSDLVW QQMYAEDRRA VFQEPWEFYT1320
 1321 KKHNINLLRE KPSHFNSYPT DATPLYWPLP STMLGDRTAS YNGFLRFKIW NEDNRRGLHG1380
 1381 IRPDQQYFRH FPQVIIFGNN RIELEHIPME INDDGIYKIR LHESEWRVRH SPELTLTRKQ1440
 1441 MMVALQDTQG IYIRGTYTYP ARGDAINIQE VSLDVAVPES KIVAGLSTTK AIGVEKCLGC1500
 1501 PQGYTGLSCQ NPEVGYYRKK HREYLNQADD IALIGWSEPC SCHGHSQTCN PDTSVCTDCE1560
 1561 HNTFGDFCEH CLPGYIGDAR EGGANACTKC ACPLVENSFS DSCVAVDHGR GYVCNSCKPG1620
 1621 YTGQYCETCV AGYYGDPQHI GGTCSPCDCH PDGSLHGACN PLSGQCECKP GVTGRTCSMC1680
 1681 QERHAFINRV CTSCDQGCYL PLMETMDTME EHLGRQNFSG LKPIPWKRVW RIGNESQDLS1740
 1741 TFVGGIDKDG EIVKDSKWAK DAFALLDEVN FQMGRSNKSA VSIKQFTGIA EQLILDAQIH1800
 1801 YANAFNTTNF LKMFAEHGAT TVGGAALDGM LMEAEAHLNA TVERGEYVEK RLNRAQQEHK1860
 1861 KAEELLKMVT AQKLNETIFE DLKNRIDVLE QWMNDYRETI YDVSKKDTAD AERMSLVVGK1920
 1921 RINRYKEVSN EIEKLRVEAE DQIAYSRNSI EKARSEELMN MFEDKEKINM TLAELPDLVE1980
 1981 QCQNITLLYS QLIDEYDEEY VQTAGRHAEK LEVQAQKIVD RFVDTRTETE NPLKASHAYE2040
 2041 NIVEALKNAT EAVDSAAEAS EAVSKMLGSE GSESGDANEE SLRSQLEKLK NESSLSNVDN2100
 2101 SNAVKIVEEL KKEKKDLTDR LGHLNELKTS IVKRLGVIKN EASSWDDKHD RMHSILKNGA2160
 2161 KTAHERSANV KKESEGIKTE VSAIKAEVEK LMNSTSSGVQ EDMEKIRASR TGMEYGAQKL2220
 2221 TKVNKLSTAN QGRTDKMARN IAILKAKIEQ AREKAYQIRL SLNSGERGLC KRSYISPASP2280
 2281 SPVNTFHVSY RPLQQVSDAV ILVSKTKGRR TQPSEHLAVE IRDKRVVVHW DIGSGKKMIT2340
 2341 NSHPINYVPS NDRVTWYHID VLRIGNAVNL TVALKESYDG GFKPRGAPVS VFVGNSKDDN2400
 2401 SIFNTIPGET TIDVGTDETV ASDIGLTTHK FSGIVGGLRI DEVPLPLWSF ESTTGECEGA2460
 2461 TSPPKTSQRG HLFRDGFANV SMSVSERTMS AITVIFNAFS PNGLLYFRGS EASGDFVAIY2520
 2521 LNDGKVMFKI NLGGGSVAEL TSQNVYNDGK EHTVKAIRTG SEMYLQVDSD ADRFNTVITG2580
 2581 ENTALNIENE NHYVAGVPMT LNKEVFGDIN WNGFIGCILT VKPSQVGELD LDHPEHSQGK2640
 2641 TDGCSQVSGV TDKIIGFPKP GYLITKGISI DNSSTFAFSF RTREENGTLV YQSSKLQKVS2700
 2701 KRDSEDDGKG YIAFYLFRGY LVLHFGKDAS SRKEVVTFRS SHPYNDGQVH AVFMERNGKI2760
 2761 ISVKVDDKEI GDSQSLSDET SVGTTSGRLI LGGFSDDLKP PNNEIPITSF FIGCISDVFL2820
 2821 NMKRVSLAPE KHNAQIGMCS MDDTQGLSPI DDPIDGNGHN GHRKSSKLSF EATNRNYYEV2880
 2881 STQSSHLVMN PNGEETVEKT CETSLGSLQG AVRYGLSKSS HSRINFEAPY PNITDFTVKL2940
 2941 SLQTETSNGM IWAWANYKNY TRYIFLDIID GFATLEVKGH KQPKILKHLG NRINDGQWHD3000
 3001 ITVEKKNRSL KLIIDSLGPV EMTDCPTPKV MKKRVYVGGV ISRHRRQFGL TTPGLDGCIR3060
 3061 DFEMNNRIFN NLDEPSTSKN VMPCAKACKL KRSSKRKRNS KN

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