YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mmaa-1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVRSLLRVS RLTSASCRHA SLAVSSTPKP YIPSVTGVQK SMPFDNLLEQ YSRVHWDDSV  60
   61 TYDDPNVQKL FKSLMSGSRA ALASAITLVE SRHPTKRAQG NMLLKMVLDE EREKYKKFGR 120
  121 DSMIFRVGIS GSPGVGKSSF IEALGAELTE NRGKKVAVLT IDPTSAMTGG SVLGDLTRMQ 180
  181 ELSRNPKAYI RQSPTSGSLG GVTRGIHEAV ILCEGAGYDI VIIETVGVGQ SETSVSDMCD 240
  241 MMCLLLSPAH GDELQGVKRG IMEMSDLLVV TKDDGDLKAK AKMTQAEYIS ALKFMRPRLD 300
  301 VWRPKVMRSS IMDKESVSEV CSSLYEFWDT IGESGDLERR RQDQMKKWMW NHVKDEIMSV 360
  361 FQKHPKIAHL APKLENEIRS GKITPGLAAE TMIRTFFGV

Type	Start	End	Confidence
Signal Peptide	1	23	0.67
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	399	0.99