YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: egl-15
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.10
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYFLASCLG VGLLSTVSCS LQGLTSHYRE NIPRFKHVAN ERYEVFLGDE IKFDCQTAAS  60
   61 KISAFVEWYR NDKLLKNDQI DKDKIRKDNN RMMLHLKNID VSDQGLWSCR VHNAYGQISR 120
  121 NFTVEVIDFC DYFLFPDIHH LNIPMECVCL WKYNKEAKRS DVNYAAVTGE VCSKYASRMI 180
  181 NRARKPLPMI PCFGDHCKEF DTTPVSDFGL PGKPEDDPLV KRVVLKKDDV IVPVHDSEES 240
  241 PSESRTEFIN ADEKENKEDE EEDYSVSQPV APDAGLTELN ITAEEPPYFK SNDNIVLFNE 300
  301 THALPAGRTL KLNCRAKGYP EPQIIWYKNG KMLKKSSARS GGYEFKFNRW SLEVEDAVVA 360
  361 DSGEFHCEAL NKVGSAKKYF HVIIVNRMRR PPIIVPNILA NQSVNINDTA TFHCKVVSDL 420
  421 LPHIIWVRIN KINGSYSYYN NSAEEYMFNY TEMDTFDKAH VHHVGDESTL TIFNVSLDDQ 480
  481 GIYACLSGNS LGMSMANATL TVNEFMAIHL LTGDEPKIDR WTTSDYIFTT ILLFLLLAAT 540
  541 LFGILFMVCK QTLHKKGFMD DTVGLVARKK RVVVSKRPMN EDNENSDDEP SPYQIQIIET 600
  601 PITKKEAARK QRKRMNSENT VLSEYEVDSD PVWEVERSKL SLVHMLGEGA FGEVWKATYK 660
  661 ETENNEIAVA VKKLKMSAHE KELIDLVSEM ETFKVIGEHE NVLRLIGCCT GAGPLYVVVE 720
  721 LCKHGNLRDF LRAHRPKEEK AKKSSQELTD YLEPRKASDK DDIELIPNLT QRHLVQFAWQ 780
  781 VAQGMNFLAS KKIIHRDLAA RNVLVGDGHV LKISDFGLSR DVHCNDYYRL KRGNGRLPIK 840
  841 WMALEALDSN VYTVESDVWS YGVLLWEIMT LGGTPYPTIA MPELYANLKE GYRMEPPHLC 900
  901 PQEVYHLMCS CWREKLEERP SFKTIVDYLD WMLTMTNETI EGSQEFNDQF FSERSTASGP 960
  961 VSPMESFQKK RKHRPLSAPV NLPSEVDQNP QHTICDDYES NFSVEPPNDP NHLYCNDNML1020
 1021 KNHIITPETS QLYIHKVLNE PIGNGYVRQD KLARAVSGVA NQSLDSALGS PAWPSYDRPS1080
 1081 NKASCLDDEK HHYYYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle