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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE31539
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQRSFGSEI GNMTAATNSN DIADVSLATP LKSTEQMEKS ENGTAVSRLP KPLAIEVYSK  60
   61 VHNSNLSEDD LLDEIEDLID EKFFAGEKLM SSGKEYTVVS SEKRGGLTLY TMEDGTKIGH 120
  121 RDLRRKKGLS VEEIKKIAIE DAEFVDEKQW KVREELLAEN PIREIKKYAP IFSANRKSTP 180
  181 KTAQLSVAAE ADDSDVQEVS MDAESGAEAA NKSAMKTPRG APRASGGPVI LSSRRLQEKQ 240
  241 KEKDEKEKEK LEKKQKEQEE KKQKKEEEKA KKLKEKEEKL KEKEEKAARK AEKKEKNNGT 300
  301 MDKFLKKDTG SPSSKNAPLF SPSKWGEKRI AVGVKKMEDA WKRRDLELYN EACSWCEKNL 360
  361 SGNQRSTFEN PIFKFSVQKL VDKAKDRAHM KGMKWAQKAE FKAEMSEKRK ELYQKFEPKI 420
  421 KAWFNEDIAL DDLLVTCENL ELLDAKRVNC DEELLKCLEI SQFFVSMRKI LLWNENITAE 480
  481 QLRDDLHGGF DGFKRSTYKM IANLLETALQ EKEHEKAAHC NARLSEFPIN EHTISELIRA 540
  541 FFIGSTETSF KRDGKRAARG AHDDDDEEDG DEEEMDSREK VVEIEEKPEE NVENGAAENG 600
  601 EIGDDEEENS ESELQKQRIL ALFADSCHIY ELPAGAQLEV LCAMKEVVHG LPIIREWFLR 660
  661 DANSEKLTEH KKEANRIRNE MEQFHQQLQD FPPIPEITES MTRTQTREAE QSLRRREKLE 720
  721 NQLDTLKIEL EENREATARE VDDLERIFRV VHIGNDRHLR KYYWFAYSSD AAIWVQDFGT 780
  781 TSYEKWVRDC SEKGFMDVES SDVENRPEYE DLPLTSSQSS ETWYKLDTEP AIRQLMTQLK 840
  841 TNGKREKLLK KYLRNNMDDI ISSILRKEKK QKKDDGEEED EEASEEDEAS AAAENGEEKM 900
  901 ETEQNETAAA AAAETQEAEK NARRFTGRFG SLKRTMSELL NDWKQSGISK IVDSQVFEAR 960
  961 MLEANTLDEM KRLVTELVTS IPVECVIEKF PQNVAIAKKF LNFSTILLEK WKNYEFSDFF1020
 1021 RAKCRIFNYF LLFSHKTSKF LEKLNQTMKI GAKFGICAIF QKPKDVRLLP KKKECFSHLK1080
 1081 MPRFCRRVQE ASNASCLHML LAYFDARIDQ QRTLPELSCQ VCRRKTGTER KLMCKQCSTV1140
 1141 FHYGCHRPTI SRALFEEEGF KEGWWCAKCT KEDRRRQLSE AKEDLRQKEE GGGDEEDHHG1200
 1201 SGESDDEDEE DIVEEETRGR SAKRKANAAM RDVLEFEGVL RQTPAPPPPK RQKTVVVPEV1260
 1261 LELFNSIERA NPRLYKTLQQ IPGQSRSTRN AQHENRSLPD IEQDLDVYTS AEQLHEHLSQ1320
 1321 FFRHARGYIE THNPRKFSKF SCPFKIFFHP PATSFGIFLK FFIMAFDHFI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle