YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ugt-37
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.53
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILILLFAC FNVNFSYNFL IFSPLFGHSH TTFFAKIADT LSEAGHNVTF FTPTIIRKFS  60
   61 KINYVKHTKH VIHLEPSEKL ERYGNQMEDV DISRFWTDDS SMAEMFPMIK LFNEMFAEQA 120
  121 FVLGQNLDVL DELKEMKFDV MIFERFAECA YPLLEYLEIE TFIPSSSLLF DPNLLISIGE 180
  181 PRIPSTVPLP MSKFTDKMTM TERLLNAIAV PIFHSLLPTH EFKSFRPPYQ AIDIQKMEHL 240
  241 SSFILSNSNP YIDYPRPTLE KNVQIGGISV DVENLKIHKV NEEWDRILDM RQKTILVSFG 300
  301 SVMLSKDMPV ENKKILAKTM KQFPEVTFIW KYEFNDTDLF ASETENIHFS SWVPQTALLA 360
  361 DRRLTAFFTH AGLGSVNEVS YLGKPSIMCP IFADQMRNAK MLARHNGSIE ISKYDLGNGE 420
  421 KIEKTLRTIL FDDSYRLSAE KLAHQLANQP VKPKELLLRH AEFAAQFGRL PSLDPYSRQL 480
  481 SFVEYFLIDV AAILIFSSLL IVVVLFQIIK RLINFLPVTV DSRKVKTN

Type	Start	End	Confidence
Signal Peptide	1	16	0.52
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	484	0.98
Transmembrane Helix	485	509	0.88
Cytoplasmic	510	528	0.98