YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE30746
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYLNIKTFI PSLSLTHDVY LSKAIGEPVM PSVVSDVCSP FGDKLSLLER AFNAFAVPYI  60
   61 DIVLGYPVHN TLSAPYTEID IRTIEPEASF LFLNSNPFLD FPRPTLTKTV EIGGITVDLN 120
  121 QLKSQQLDSK WSDILNLREK TMLVSFGSVF FSKDMPLENK KVIANSMTEF KNVTFIWKYE 180
  181 GNDIEDFARG IQNIHFVKWV PQTALLANRR LSAFFTHAGL GSINEVSYLG KPSILCPLFA 240
  241 DQMRNAKMLV RHNGSIELSK YDLGNSKKII EAFQAILFDS SYAENAQKLA EQLENQPIKP 300
  301 EKMMVKHAEF AARFGRLPSL DPYSRKMSFV EYFLLDVATI CVLVLACVVF VLTRVVQFLC 360
  361 RRFLVKIKTE

Type	Start	End	Confidence
Non-Cytoplasmic	1	331	0.89
Transmembrane Helix	332	356	0.87
Cytoplasmic	357	370	0.85