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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE30744
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSHAYARLL LLLHLCTVSL VLCDQFCATD GNDTPIITDP NYMCNDANFT NLRNPPLQNS  60
   61 SSYTNNCDVV FLLDLDSTFT TEENYTQVIQ FISDATDTCM KRGVGYAVFA FPMFNDTHET 120
  121 VCCSPSQCKT AFGFMNYRDY VGKYDDMEPV QPSTNQYNFS FVLINDLKRV GSPQSACLYN 180
  181 NYVLITNRLF NITDQTLVLA EIAKILRTGC ITFTIIAVGN SEIDTKMMYD VYKTVTLNTY 240
  241 VVQSFNCLDI LKDCIKPCGT GGSQQCYDVT LDVCATPTTA EPTTTVTSTS TPKPTLDPEY 300
  301 LNDWQITYLF AITNRTSQEQ FSRLVKYISD PLEDCSGKAM IIRFLARNNS NSGWISDVDQ 360
  361 VAPYLQQLSY DEVLIASDNR TLLPGNDNVT FDLVWEAVST SPCYNEDGTV HVPKVVLLTD 420
  421 FVSNVFVAQY NTTLLPLLEF YEFSIIAFTE EAYDGYKSKL AMKAFQITND EGYGDTNELK 480
  481 LCPKQGSNVT TIMFIIIGTC SGAMLILILL TVLYRQKFDH WELSWDKLVV KNEKLGHGAY 540
  541 GHVFKGKIVG VPPAIEKYNR AEALDYTDCD CAVKMLPKYA TDAAKQEFRH EIELMKNLGF 600
  601 NEHLVNMLGC ITVSAKSCLV LEHCCHRDLL RYVKNKKCDL EISRSVDDTI DSHKEFLNFA 660
  661 WQITQGMRFL VDKRIIHRDL AARNILITEQ CGMKSAKVSD FGLAILSEPS ENGEVTGSDR 720
  721 LPIKWLALEC LEKAEFSFKS DVWSFGIVIF EMYSLGDVPF AEIEPTELIA HLKSGARPKF 780
  781 PLLATDKIEE IMSSCWSEKS EERPDFDELS KLFATQLEQT TEGYGYLELI RTKDYRVIAE 840
  841 ALQKPDDSPT DGTDEPICID DHPPYVTRNR SVTWRSKANG EAKLGREYSM TTHVCEDETH 900
  901 QLPNGVPKLP SAAPAEPHEK DKKEKKKSYL NLNIPNILPS LNAINPFSKD NEFKKTFKRK 960
  961 KASSRRGSTN F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle