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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: atgp-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDATDRLMPG PEGKTPRFYE VDRGNKTESY ISAVSGNPVV PEHIMRKEKR QEQEEAPPQK  60
   61 SWERPPAPTN PKNTDQIGLS EQELEQFRND PCWKFIRTVL FVLFWLIWLA LFAVAILLVC 120
  121 FSPTCVLRAK PNWWQTAVAY HVWVPSFQDS DGDGVGDVDG LINRLDQLRK SGVQTVWPSP 180
  181 FLISDDEKTA VRSFSQMDPK IGVNQKADEL INKIHEKEMN IVISFPIATT SLEHEWFLNS 240
  241 ATASKTPNAN YSQFYTWVSK AADSNFFTEH KNLFYLHEKG NPKSAVLNWQ NSNLREHMFN 300
  301 ALSNWIDRGV DGFELQGIEY LARTPNGTEP DWNSIYDVIR DIRFHVDSYS NESTIADGKK 360
  361 IALFSTREEA KEKDKKRMAK SGMDTVINYE LGEVEKDTKI CHKNEGSVAT CVHEILSDVL 420
  421 LFHSLNEQVW PHWRFGSPDL ARIASRVGSR PHAQLLMVLQ MILPGTNNIY YGEEIGMRNL 480
  481 ANDSRVPPQK GAMQWDDSLN GGFTSAISPP VPSNIDVANI NWKRQYAEPQ STLKIFAKLA 540
  541 KLRQREDALM TGTTLIGRLV DGAFTITRFN NFENRTTGNI YVAALNFAEH PVKLPLTDLP 600
  601 SNSKLHKSTI VTATSNCVAY YARQTVDFGL KEIELEPNEG VVFRYSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle