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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kqt-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQASQEDND GGDLLSPESP MTPDGMILAR MPWHPGLIGN WNTVKSVSCS MLNGDETDQA  60
   61 APSDEQQEAG SSSAIGQESR KTVVFQEPDI GFPSEHDQLT TLHDSEEGNR KMSLVGKPLT 120
  121 YKNYRTDQRF RRMQNKMHNF LERPRGWKAA TYHLAVLFMV LMCLALSVFS TMPDFEVNAT 180
  181 IVLYYLEIVF VIWLATEYIC RVWSAGCRSR YRGISGRIRF ATSAYCVIDI IVILASITVL 240
  241 CIGATGQVFA ASAIRGLRFF QILRMLRIDR RAGTWKLLGS VVWAHRQELL TTVYIGFLGL 300
  301 IFSSFLVYLC EKNTNDKYQT FADALWWGVI TLSTVGYGDK TPETWPGKII AAFCALLGIS 360
  361 FFALPAGILG SGFALKVQQH QRQKHLIRRR VPAAKLIQCL WRHYSAAPES TSLATWKIHL 420
  421 ARELPPIVKL TPNGSNNATG LINRLRQSTK RTPNLNNQNL AVNSQATSKN LSVPRVHDTI 480
  481 SLVSTSDISE IEQLGALGFS LGWKSKSKYG GSKKATDDSV LQSRMLAPSN AHLDEEEAVG 540
  541 YQPQTIEEFT PALKNCVRAI RRIQLLVARK KFKEALKPYD VKDVIEQYSA GHVDLQSRVK 600
  601 TVQAKLDFIC GKNIEKIEPK ISMFTRIATL ETTVGKMDKK LDLMVEMLMG RQASQRVFSQ 660
  661 NTSPRGEFSE PTSARQDLTR SRRSMVSTDM EMYTARSHSP GYHGDARPII AQIDADDDDE 720
  721 DENVFDDSTP LNNGPGTSSC 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle