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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tre-5
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRETLLAILL IVYVSARPQK DPRGPNIIDD NADFGTPEHD NRVHTELTQL TDKEVAQLIG  60
   61 SDYFNGSVLP CDNETAPGQW MIYCSGKLLQ TVMAVQLYPD SKTFVDQPMK ENQTGKSIME 120
  121 HFEKRFPVSI EKITKKDVAE FVDEFFDKEG NELDVCDLPD WRPITEQLAN IKDASYQAFA 180
  181 QRLHFIWIQL CRQIKPEVKN DPSRFSLIYV PYQFILPGGR FREFYYWDAY WILKGLIASE 240
  241 LYSTARMMIL NFAHIIETYG FVPNGGRVYY LRRSQPPFFA PMVYEYYLAT QDIQLVADLI 300
  301 PVIEKEYTFW SERRTVNVTY EHPDLNETLH MFQYRTEAET PRPESFREDV LSAEHFTTKD 360
  361 RKKQFFKDLG SAAESGWDFS SRWFKNHKDI STIETTNIVP VDLNAFLCYN MNIMQLFYKL 420
  421 TGNPLKHLEW SSRFTNFREA FTKVFYVPAR KGWYDYNLRT LTHNTDFFAS NAVPLFSQCY 480
  481 DPLNSQIAVD VYNEMQNSGA FSIPGGIPTS MNEETNQQWD FPNGWSPMNH MIIEGLRKSN 540
  541 NPILQQKAFT LAEKWLETNM QTFNVSDEMW EKYNVKEPLG KLATGGEYEV QAGFGWTNGA 600
  601 ALDLIFTYSD RLQYNGPILE SLVGSQTTSM KSSPDSSTSL PIDITTTITT SSSSSTFGYS 660
  661 NILTLITVFV LYIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle