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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE30721
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQNPTNAK YSTLSLGEPI RLPPSHPGKI IAKITTAFIG VLVVSATILV ALSGTTPSSH  60
   61 LAAPSHKALA TQEEPIHLEN DSQNRYVEFQ YDPISGKYSH VNKNGSRINP FVVKNVERHS 120
  121 EKPYDAYLHK KDKNEEGSIY WKFNLKSTEK ILEKLEIRMV SINNIADGGG KAEACLQPSE 180
  181 VCKDIPVGGV LIFEKPESET LTVGIKLFKD IQLFGRDEKC TECGKFERGF TVKAFWKSLY 240
  241 LAEKITTQNK LIQFNPNSGD NYVKFTYSIL NNTYSHDNID GSPVAPYFVD KIERLVDRTN 300
  301 NEVYLRQEFP GVFSNMYWAF NLTNDGKLVE KVVISIPGIE ELTNNRAGVV EACENIHEDC 360
  361 NIFLENETLT IMQQMDTLYI SITLWKDISV LKTKLKGVSN VESFKIEVYW TTTTPGSIVT 420
  421 TKSSTTPITE PDHQPDISTT PLTESYEIIQ LKPETGRDYA KFTYDVISNT YSQSYEDGSP 480
  481 VKPYLASNVE HVVDRRLNVA YIHMKEPINK RIGLINWEFD FNSPGRTVEK LDIKLAGMDE 540
  541 IVNNGGTANA CQHVFKCTAI PTNGSLTIEK PQFNKFFMRI ELFKNIKVFK TELNDRSSVE 600
  601 SISIVVYWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle