YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: glr-2
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.63
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKNLLVFGF LIFVKIGETS KKFPLRAFVA STDIDNDTAH AIIEMLRLAE MTFNALSDVD  60
   61 FDVLLGTRDL PPMEMATMMW NLNRIICDEM KLGYMLMLAG TNFKNYGIYE DIANHMKMPL 120
  121 IDWEPSKSEN IGKTTENNPM IFSVAPSAEQ LLIDYIQYKG WRDVVYIHDG KNADRTLRTM 180
  181 FSYLHEKSPK YQLFVDNYVA PSDEEMFKEF LNEFHRRIST QHTLKSNDSS EEIDEPIKTR 240
  241 AEFHDVYRGG FSNTDSIPTA AAFAHDAILV AGKALQIAMN EHGKGIFDKS FVRHQLFNRG 300
  301 RKGLYCRPHE DQTESRQFET FEHGKKIAEA IKKVVLTDKD GTLTGRIQFD KVTGKRTNFS 360
  361 AEIVEIKPGV NSLNSIWERF QWAEGEGFLL GGERYVQEKK KDSSQTRKGI LPSKPWQLRF 420
  421 NVVTVLVKPF VMLKRRNPGE PELKGNDRFE GYCIDLLNLL AKNITGFEYD VFISDGNKYG 480
  481 SRQADGSWDG MIGYLLNETA DVAVAPLTIT QERERAVDFS KPFMTTGISI MIKKPEKQEF 540
  541 NIFSFMEPLG MTIWIFTLSS YFGVSLTIFL VSWFSPYEKR IEFKRGEFTV TNEFTLYNSL 600
  601 WFTLAAFMQQ GTDILPRAVS GRIASSCWWF FTLIIVSSYT ANLAAFLTLE RMTPPIESVE 660
  661 DLANQNKILY GVNEGGSTAA FFEDSIVPLY KKMWNFMVST TQKQIELEKQ SITNSTSNRI 720
  721 FVSSYADGIE KVRTSKGKYA FLLEETTNNY ESGRRPCDTM KVGQNLNTLG YGIATKIGNP 780
  781 LRVSLNLAIL YLSEKGELKK LENKWWYDRG QCDTGTSDGG TSSSLNLSKV AGIFYILLAG 840
  841 MVLSMCTALV EFLFRKNKEN REKERNRMRS SRPLKPGILA SCERAKQKQL QNRRTKSEEV 900
  901 STPRSTLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle