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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-32
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDYVTPGEE PPQPGIYRSE QMCLAQLYLQ SDASYQCVAE LGELGLVQFR DLNPDVSSFQ  60
   61 RKYVNEVRRC DEMERKLRYL EREIKKDQIP MLDTGENPDA PLPREMIDLE ATFEKLENEL 120
  121 REVNKNEETL KKNFSELTEL KHILRKTQTF FEEVDHDRWR ILEGGSGRRG RSTEREETRP 180
  181 LIDIGDMDDD SAARMSAQAA MLRLGFVAGV IQRERLPAFE RLLWRACRGN VFLRTSEIDD 240
  241 VLNDTVTGDP VNKCVFIIFF QGDHLKTKVK KICEGFRATL YPCPDTPQER REMSIGVMTR 300
  301 IEDLKTVLGQ TQDHRHRVLV AASKNVRMWL TKVRKIKSIY HTLNLFNIDV TQKCLIAEVW 360
  361 CPIAELDRIK MALKRGTDES GSQVPSILNR METNEAPPTY NKTNKFTKGF QNIVDAYGIA 420
  421 TYREINPAPY TMISFPFLFA VMFGDMGHGA IMLLAALFFI LKEKQLEAAR IKDEIFQTFF 480
  481 GGRYVIFLMG AFSIYTGFMY NDVFSKSINT FGSSWQNTIP ESVIDYYLDD EKRSESQLIL 540
  541 PPETAFDGNP YPIGVDPVWN LAEGNKLSFL NSMKMKMSVL FGIAQMTFGV LLSYQNFIYF 600
  601 KSDLDIKYMF IPQMIFLSSI FIYLCIQILS KWLFFGAVGG TVLGYKYPGS NCAPSLLIGL 660
  661 INMFMMKSRN AGFVDDSGET YPQCYLSTWY PGQSFFETIF VLVAIACVPV MLFGKPYFLW 720
  721 KEEKERREGG HRQLSVRADI NQDDAEVVHA PEQTPKPSGH GHGHGDGPLE MGDVMVYQAI 780
  781 HTIEFVLGCV SHTASYLRLW ALSLAHAQLS DVLWTMVFRN AFVLDGYTGA IATYILFFIF 840
  841 GSLSVFILVL MEGLSAFLHA LRLHWVEFQS KFYGGLGYEF APFSFEKILA EEREAEENL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle