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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-32
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDYVTPGEE PPQPGIYRSE QMCLAQLYLQ SDASYQCVAE LGELGLVQFR DLNPDVSSFQ  60
   61 RKYVNEVRRC DEMERKLRYL EREIKKDQIP MLDTGENPDA PLPREMIDLE ATFEKLENEL 120
  121 REVNKNEETL KKNFSELTEL KHILRKTQTF FEEHEDMIAS SAESSGIGEV LSADEEELSG 180
  181 RFSDAMSPLK LQLRFVAGVI QRERLPAFER LLWRACRGNV FLRTSEIDDV LNDTVTGDPV 240
  241 NKCVFIIFFQ GDHLKTKVKK ICEGFRATLY PCPDTPQERR EMSIGVMTRI EDLKTVLGQT 300
  301 QDHRHRVLVA ASKNVRMWLT KVRKIKSIYH TLNLFNIDVT QKCLIAEVWC PIAELDRIKM 360
  361 ALKRGTDESG SQVPSILNRM ETNEAPPTYN KTNKFTKGFQ NIVDAYGIAT YREINPAPYT 420
  421 MISFPFLFAV MFGDMGHGAI MLLAALFFIL KEKQLEAARI KDEIFQTFFG GRYVIFLMGA 480
  481 FSIYTGFMYN DVFSKSINTF GSSWQNTIPE SVIDYYLDDE KRSESQLILP PETAFDGNPY 540
  541 PIGVDPVWNL AEGNKLSFLN SMKMKMSVLF GIAQMTFGVL LSYQNFIYFK SDLDIKYMFI 600
  601 PQMIFLSSIF IYLCIQILSK WLFFGAVGGT VLGYKYPGSN CAPSLLIGLI NMFMMKSRNA 660
  661 GFVDDSGETY PQCYLSTWYP GQATIEIILV VLALVQVPIM LFAKPYFLYR RDKQQSRYST 720
  721 LTAESNQHQS VRADINQDDA EVVHAPEQTP KPSGHGHGHG DGPLEMGDVM VYQAIHTIEF 780
  781 VLGCVSHTAS YLRLWALSLA HAQLSDVLWT MVFRNAFVLD GYTGAIATYI LFFIFGSLSV 840
  841 FILVLMEGLS AFLHALRLHW VEFQSKFYGG LGYEFAPFSF EKILAEEREA EENL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle