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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-32
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDYVTPGEE PPQPGIYRSE QMCLAQLYLQ SDASYQCVAE LGELGLVQFR DLNPDVSSFQ  60
   61 RKYVNEVRRC DEMERKLRYL EREIKKDQIP MLDTGENPDA PLPREMIDLE ATFEKLENEL 120
  121 REVNKNEETL KKNFSELTEL KHILRKTQTF FEEAGTGEML PPAAVESEEG LELTQHAAAG 180
  181 GATMFANFGF VAGVIQRERL PAFERLLWRA CRGNVFLRTS EIDDVLNDTV TGDPVNKCVF 240
  241 IIFFQGDHLK TKVKKICEGF RATLYPCPDT PQERREMSIG VMTRIEDLKT VLGQTQDHRH 300
  301 RVLVAASKNV RMWLTKVRKI KSIYHTLNLF NIDVTQKCLI AEVWCPIAEL DRIKMALKRG 360
  361 TDESGSQVPS ILNRMETNEA PPTYNKTNKF TKGFQNIVDA YGIATYREIN PAPYTMISFP 420
  421 FLFAVMFGDM GHGAIMLLAA LFFILKEKQL EAARIKDEIF QTFFGGRYVI FLMGAFSIYT 480
  481 GFMYNDVFSK SINTFGSSWQ NTIPESVIDY YLDDEKRSES QLILPPETAF DGNPYPIGVD 540
  541 PVWNLAEGNK LSFLNSMKMK MSVLFGIAQM TFGVLLSYQN FIYFKSDLDI KYMFIPQMIF 600
  601 LSSIFIYLCI QILSKWLFFG AVGGTVLGYK YPGSNCAPSL LIGLINMFMM KSRNAGFVDD 660
  661 SGETYPQCYL STWYPGQSFF ETIFVLVAIA CVPVMLFGKP YFLWKEEKER REGGHRQLSV 720
  721 RADINQDDAE VVHAPEQTPK PSGHGHGHGD GPLEMGDVMV YQAIHTIEFV LGCVSHTASY 780
  781 LRLWALSLAH AQLSDVLWTM VFRNAFVLDG YTGAIATYIL FFIFGSLSVF ILVLMEGLSA 840
  841 FLHALRLHWV EFQSKFYGGL GYEFAPFSFE KILAEEREAE ENL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle