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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: catp-7
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNNYQTLS QNKADRMGPG GSRRPRNSQH ATASTPSASS CKEQQKDVEH EFDIIAYKTT  60
   61 FWRTFFFYAL SFGTCGIFRL FLHWFPKRLI QFRGKRCSVE NADLVLVVDN HNRYDICNVY 120
  121 YRNKSGTDHT VVANTDGNLA ELDELRWFKY RKLQYTWIDG EWSTPSRAYS HVTPENLASS 180
  181 APTTGLKADD VALRRTYFGP NVMPVKLSPF YELVYKEVLS PFYIFQAISV TVWYIDDYVW 240
  241 YAALIIVMSL YSVIMTLRQT RSQQRRLQSM VVEHDEVQVI RENGRVLTLD SSEIVPGDVL 300
  301 VIPPQGCMMY CDAVLLNGTC IVNESMLTGE SIPITKSAIS DDGHEKIFSI DKHGKNIIFN 360
  361 GTKVLQTKYY KGQNVKALVI RTAYSTTKGQ LIRAIMYPKP ADFKFFRELM KFIGVLAIVA 420
  421 FFGFMYTSFI LFYRGSSIGK IIIRALDLVT IVVPPALPAV MGIGIFYAQR RLRQKSIYCI 480
  481 SPTTINTCGA IDVVCFDKTG TLTEDGLDFY ALRVVNDAKI GDNIVQIAAN DSCQNVVRAI 540
  541 ATCHTLSKIN NELHGDPLDV IMFEQTGYSL EEDDSESHES IESIQPILIR PPKDSSLPDC 600
  601 QIVKQFTFSS GLQRQSVIVT EEDSMKAYCK GSPEMIMSLC RPETVPENFH DIVEEYSQHG 660
  661 YRLIAVAEKE LVVGSEVQKT PRQSIECDLT LIGLVALENR LKPVTTEVIQ KLNEANIRSV 720
  721 MVTGDNLLTA LSVARECGII VPNKSAYLIE HENGVVDRRG RTVLTIREKE DHHTERQPKI 780
  781 VDLTKMTNKD CQFAISGSTF SVVTHEYPDL LDQLVLVCNV FARMAPEQKQ LLVEHLQDVG 840
  841 QTVAMCGDGA NDCAALKAAH AGISLSEAEA SIAAPFTSKV ADIRCVITLI SEGRAALVTS 900
  901 YSAFLCMAGY SLTQFISILL LYWIATSYSQ MQFLFIDIAI VTNLAFLSSK TRAHKELAST 960
  961 PPPTSILSTA SMVSLFGQLA IGGMAQVAVF CLITMQSWFI PFMPTHHDND EDRKSLQGTA1020
 1021 IFYVSLFHYI VLYFVFAAGP PYRASIASNK AFLISMIGVT VTCIAIVVFY VTPIQYFLGC1080
 1081 LQMPQEFRFI ILAVATVTAV ISIIYDRCVD WISERLREKI RQRRKGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle