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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: slo-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEIYSPSQS KGFNQPYGYP MNCNLSRVFM EMTEEDRKCL EERKYWCFLL SSITTFCASM  60
   61 ILVVIWRVVT HLCCQRREKE FVEPIPAPEA VQINMNGSKH APSETDPFLK QQEEKHLGWM 120
  121 TEAKDWAGEL ISGQSLTGRF LVLLVFILSI GSLIIYFYDA SFQNFQVETC IPWQDSPSQQ 180
  181 IDLGFNIFFL VYFFIRFIAA SDKVWFLLEM YSWIDFFTIP PSFVAIYLQR NWLGFRFLRA 240
  241 LRLMTVPDIL QYLNILKTSS SIRLTQLVTI FVAVCLTGAG LVHLLENSGD FFKGFINPHR 300
  301 ITYADSVYFV LVTMSTVGYG DIYCTTLCGR LFMIFFILFG LAMFASYVPE IADLIGNRQK 360
  361 YGGEYKGEHG KKHIVVCGHI TYDSVSHFLQ DFLHEDRDDV DVEVVFLHRV VPDLELEGLF 420
  421 KRHFTKVEFF TGTVMDSLDL SRVKIGDADA CLVLANKYST NPDAEDAANI MRVISIKNYS 480
  481 SDIRVIVQLM QYHNKAYLLN IPSWDWKRGD DVICLAELKL GFIAQSCLAP GFSTMMANLF 540
  541 AMRSFKTSPH TPLWLNDYLR GAGMEMYTES LSPSFANMSF PEAANLLFNR LGLLLLAIEL 600
  601 KDEENKECNI AINPGPHIVI QPQTQGFFIA QSADEVKRAF FWCKQCHDDI KDVSLIKKCK 660
  661 CKNLALFRRN TKHSTAARDY SDFDALFYQN DARATDVLQQ FQPQAPAGPM GHLGQQVQLR 720
  721 MINQQRPSSG GRRNSMSIPP DGRGVDFSKD FEQQFQDMKY DSTGMFHWCP SRNLEDCVLE 780
  781 RHQAAMTVLN GHVVVCLFAD QDSPLIGLRN FIMPLRSSNF HYHELKHVVI VGDLEYLRKE 840
  841 WKTLYNLPKI SILNGSPLSR ADLRAVNINL CDMCVIISAR VPNTEDTTLA DKEAILASLN 900
  901 IKAMQFDDTL GFFPMRHQTG DRSPLGSPIS MQKKGAKFGT NVPMITELVN DSNVQFLDQD 960
  961 DDDDPDTELY LTQPFACGTA FAISVLDSLM STTYFNDSAL TLIRTLVTGG ATPELELILA1020
 1021 EGAGLRGGYS TPETLSNRDR CRIAQISLQD NPYDGVVHNT TYGAMFTIAL RRYGQLCIGL1080
 1081 YRLHDQDNPD SMKRYVITNP PAELRIKNTD YVYVLEQFDP GLEYEPGKRH F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle