YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: slo-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEIYSPSQS KGFNQPYGYP MNCNLSRVFM EMTEEDRKCL EERKYWCFLL SSITTFCASM  60
   61 ILVVIWRVVT HLCCQRREKE FVEPIPAPEA VQINMNGSKH APSETDPFLK QQEEKHLGWM 120
  121 TEAKDWAGEL ISGQSLTGRF LVLLVFILSI GSLIIYFYDA SFQNFQVETC IPWQDSPSQQ 180
  181 IDLGFNIFFL VYFFIRFIAA SDKVWFLLEM YSWIDFFTIP PSFVAIYLQR NWLGFRFLRA 240
  241 LRLMTVPDIL QYLNILKTSS SIRLTQLVTI FVAVCLTGAG LVHLLENSGD FFKGFINPHR 300
  301 ITYADSVYFV LVTMSTVGYG DIYCTTLCGR LFMIFFILFG LAMFASYVPE IADLIGNRQK 360
  361 YGGEYKGEHG KKHIVVCGHI TYDSVSHFLQ DFLHEDRDDV DVEVVFLHRV VPDLELEGLF 420
  421 KRHFTKVEFF TGTVMDSLDL SRVKIGDADA CLVLANKYST NPDAEDAANI MRVISIKNYS 480
  481 SDIRVIVQLM QYHNKAYLLN IPSWDWKRGD DVICLAELKL GFIAQSCLAP GFSTMMANLF 540
  541 AMRSFKTSQT TPDWLNLYLC GAGMEMYTDT LSHSFVGMTF PEAVDLLFNR LGLLLLAIEL 600
  601 KDEENKECNI AINPGPHIVI QPQTQGFFIA QSADEVKRAF FWCKQCHDDI KDVSLIKKCK 660
  661 CKNLALFRRN TKHSTAARAR ATDVLQQFQP QAPAGPMGHL GQQVQLRMIN QQRPSSGGRR 720
  721 NSMSIPPDGR GVDFSKDFEQ QFQDMKYDST GMFHWCPSRN LEDCVLERHQ AAMTVLNGHV 780
  781 VVCLFADQDS PLIGLRNFIM PLRSSNFHYH ELKHVVIVGD LEYLRKEWKT LYNLPKISIL 840
  841 NGSPLSRADL RAVNINLCDM CVIISARVPN TEDTTLADKE AILASLNIKA MQFDDTLGFF 900
  901 PMRHQTGDRS PLGSPISMQK KGAKFGTNVP MITELVNDSN VQFLDQDDDD DPDTELYLTQ 960
  961 PFACGTAFAI SVLDSLMSTT YFNDSALTLI RTLVTGGATP ELELILAEGA GLRGGYSTPE1020
 1021 TLSNRDRCRI AQISLQDNPY DGVVHNTTYG AMFTIALRRY GQLCIGLYRL HDQDNPDSMK1080
 1081 RYVITNPPAE LRIKNTDYVY VLEQFDPGLE YEPGKRHF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle