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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gbb-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESGSGGWAG GEACLPAVEM ALKDVNSRLD ILPGYVLNMT NHNSQCQPGL AMQQLYDFLY  60
   61 KPPTKLMLLT GCSPVTTVIA EAAPVWKLVV LSYGGSSPAL SNRNRFPTLF RTHPSANMQN 120
  121 PTRIHIMEKF KWKRFTILMS VEEVFVTTAK DLEAIARKKG IKVDRQSFYG DPTDAMKTLQ 180
  181 RQDARIIVGL FYVTEARKVL CQAYHHGLYG RRYVWFFIGW YADTWYIPPP EEHLNCTAEQ 240
  241 MTEAAEYHFT TESVMLSRDN IPAISEMTGM QFQQRLTQYF QKDTANVGGF PEAPLAYDAV 300
  301 WALALAFNCT RNNLPSHIRL ENFTYDNKVI ADTLFQCVKN TSFRGVSGKV MFSDSGDRIA 360
  361 RTQIEQMQGG KYKIMGYYDT TSGDLEWYNK EQWLNGKGPP PDSTVIKKHA MTVSNEFYYP 420
  421 TILFAVLGIA ACVFIYLFTQ KHHERLIIFQ SQPECNNILL IGCSLCLFSL FLIGLPSDDI 480
  481 SISESLFPLL CHVSQTFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle