YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE29882
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDGNRRICF FDFLRFFGFF VWKIMQNTNY ISCFLIFFSH LLLIKCGTGS IVQKCLDGPR  60
   61 PLLDENLSIF SCQRGCPDTF FCENQLCCPN TTAISSLNRP AAAGKPNLGS RSTKAVEFQL 120
  121 ESSTELERTL PCERYPYKLS CKNDTSQPIA KWYFDIQTLS CELYPFGQCE DDPLDKLALR 180
  181 TRGECEERCD VAKVKAAIAG NSKFQINSVS SENIEREAPV APPTDPQIAI DDVIQESKHI 240
  241 RGRPFAIEPP TDLVHVIHVK SDRFPAKNLE KSIYTQEIQE KSENLAEIDE NLLLTSTMED 300
  301 GATVPTVTSN ILEILEDALE EGSGSLESLE KSGNSGEKLE ENRKNRRKSV KSLEHSFEQF 360
  361 YQRNKESVSC SATAYRLLCS SGASSQFVYR WEKVGGVCQS FPYGYCLKEQ NVAHPRTREE 420
  421 CEQFCD

Type	Start	End	Confidence
Cytoplasmic	1	18	0.52
Transmembrane Helix	19	38	0.50
Non-Cytoplasmic	39	426	0.92