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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: jph-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGGRFDFDD GGTYVGGWEE GKAHGHGVCT GPQAKGEYAG AWHYGFEVSG VYTWPSGNTY  60
   61 QGQWQNGKRH GLGIEQRGRW LYKGEWTQGY KGRYGVRQSA NSQARYQGTW SAGFHDGYGT 120
  121 EIYVDSGSYQ GQWLRGMRHG YGIRKSTTYE KAAKFRSKSQ THASLTSLRS GRVEEENAAE 180
  181 EHRHKEGLSG RGGFVLRANS SAPQRRRRSL SERSLAVKRT LLSGLRIKKQ HSTGDIHQRV 240
  241 ASMTGSLRSS GSTMSCTSED SLHHHGLQQP EEEAVEESSI ETYMGEWKND MRSGFGVCER 300
  301 SDGLKYQGEW ANNAKCGYGV TTFKDGTKEE GRYKNNILIA SSRRKGVIFM RASKFREKLE 360
  361 QALGAASRAA SIAQQKADIA ASRTSTARER SEQASFIARQ ANDDSEVARI HAKQFDPSFK 420
  421 QPGTRRLLKD NNGGESFGTD LSDAISYSRH LSQTHSKQHS FEQTLSVDMA EDMTPPSKAY 480
  481 HNHVMPNSNT NHVNFMPQYG YSDPNSQLQT PINSQDLLQP HIPNIDPSIP SVSIVQDDEK 540
  541 PLILQPQTNI SQPGPSNLST QAPNVMSSRF SLSDDHYDQY VMAGGAQQQQ KLRRNRPSLM 600
  601 RQADVNESCA ASGLNRRSTL ASARDRNGDV NHPGAIGATH AAKLTAATSD GDNMGSLPNL 660
  661 AELETQGVRL RREEAARLAG QRRQEVLREN EEAALLRANP LRHFLQPAFR AWLVRWRIPI 720
  721 LLAIANISLL MLFYHLLTYE KKKKSSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle