YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gly-17
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRLKNIILN LAVYLTFVIF ILFIAKALIP RLLENPNQRI HPPTDLLDDL QINCTNILQG  60
   61 FKNENTLELI NTKMIENKMW NSTDRCQTLT SMFRFNKVPL SEEEARFPLS FGLLVYKELS 120
  121 QVLFLLSSIY QPQNEYCIAV GENSAPAFLI LLKELANCFP NVYFMKRPPI KWGSFEIINS 180
  181 VYGCLEFLSH LKSDWKYFQY LSGVDIPLKT NLEMVRILKR LNGTVNIGIS TYEDRLLNGK 240
  241 NKTESPLPLF KSSLSSLIPR KAANYLSSSS VPQQLLEFLR TTWVADEGFW GTLFGNKDLF 300
  301 NVPGSFNFND PLTNGWGNYV SRHQLWVESE CHNYMKDRSC VFGIGDVPNL MKSRALVAHK 360
  361 LYIESEPEAF FCLLKRHRHR TINPDLTSDS L

Type	Start	End	Confidence
Cytoplasmic	1	6	0.95
Transmembrane Helix	7	29	0.89
Non-Cytoplasmic	30	391	0.99