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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: daf-9
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLVIGRFSS LSCERASIWC NMNISQSSWI KCRDWMAFAL SHHIIMGIYL LILRNFLPQV  60
   61 VPDFEWQHYF MRVFIVHIIY IIISYFIRIT RYPPGPPPMA VFGNSPFVNI LTPEQTFLEY 120
  121 REIYGPIFTL HLSQPTIILA EYKTIQEALV KNGQQTSGRS SAESFVLFTG DRLNGDGVIL 180
  181 AMRQKWKDMR HEISRFMNKW YGAPMDELVL HHTRCLEQEL AKIAETKSLI DLRDPLAGAI 240
  241 ANVIQQITIG RNYMYQDQEF QTQLRDINAV VKEIMTAEVF FVNCYPWLRY LPEGILRKWT 300
  301 NYKRSGFRLQ QWFRTILEEH HVNRHQGDFM SHMIDLQESK QEQFRDLSII LTCGDMWTGG 360
  361 METTVTTLRW GIIYLLNNPE VQAKCQMEIL DVFGNDIPDM GKMNQTPYVR ATLSEIQRLA 420
  421 NVLPWAIPHK TIEECNIGGY DIPVNTEIIP ALGAVLFDPN VFESPKQFKP ERFLDEEGKY 480
  481 RVMEEFRPFG LGPRVCLGER IARTELYLIF ASLLQNFRFY LNRGDPIPVA ERVIGGITAP 540
  541 PKPYATRVEY LGNRLIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle