YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE30396
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKPLALTG GSGSSQLQDD QVLVDALPYL DTEYNEADRQ LAMKLVEHEC KTFRPTKNYL  60
   61 THLPVPDYDA FLTKCMLKEM DRMKKKEEMG KLDMSRCELP APSAVKGVDR KLWAKVLRNA 120
  121 KAQNEHLLMR QINLELMDEY AAESYLQRNK VMEDLLTHAE KELRKTKEAV MEVHANRKMA 180
  181 QLKAGEKVKQ LEQSWVSMVT NNYRMEMENR QIDSDNRKQI KALKLDPTKL DDKEDQEN

Type	Start	End	Confidence
Signal Peptide	1	17	0.71
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	238	0.99