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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nep-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPDEEDGTT KSPGSRWTRI WAIIALILLI LFLLVLGAAI YFYINYKDSS DVCLSPGCIK  60
   61 TASVILSSMN SSVDPCDDFY EFACGQWIKG HPIPDDAPSV SNFENLGQDL EFALKELLDE 120
  121 NDEPYDYETS AVGKAKYFYN LCLNESEILD NWRTTFDEVV KSFGGWPSLG HQMKPDASIE 180
  181 MLYADMVAKF KADSLFKATV QPDDKNSQRH VLLIDQPQLN LFARDFYVAA ENEERMAYLQ 240
  241 LIRDVLILLD ADRTRATLDA KEIIDFETAL ANITMADEHR HDIAELYTKI TLGEMRRSLP 300
  301 HFNWPLFFNR MFKDLHEKNG KRITFDDNTE VVVYGYEFLR RLDVLIPQYD NRLIVNYLEW 360
  361 CWFFKTMLRD LPDPFALTIF KFYKTLNIMN VQKVRWHGCV TRINSLMPMA TSAIYVKNHF 420
  421 DHEAKQQVEE MISLIMESFV DLLLSEDWLT KETKQTAKQK VNEMKRKIGY PDYLNDPAAV 480
  481 NNEYKTFKVY PGHYYQTKFS FYEQYQRDVL ERITEAVDRE RWVAGAALVN AFYSPNTNEI 540
  541 IFPAGILQPV FYSKDFPSSM NFGGIGVVIG HEITHGFDDR GRLYDNLGNI RQWWDNATIS 600
  601 KFEHKAQCIE KQYSSYVLDQ INMQINGKST KGENIADNGG LKQAYRAYKK YEKRHSRPPR 660
  661 LPGVNLTHDQ LFFLNYAQIW CGTMNDKEAI RKLRTSEHSP GPIRVKGPLS NSYDFAKAYN 720
  721 CEPGSQMNPR EKCRVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle