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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE30548
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPFSGLFLL VISTLAQQDL SWKADIFASD RENEMAEQDA LTRYFGNDKR NTTFFPTWDT  60
   61 MKAKIGDFIN VNSTKLKNHN YNEMTAWLKA TRLNYPNITH LYSAGKSVEG RELWVLIISD 120
  121 KPKEHKLMEP ELKIVGNMHG NEVVGREAVL YLAEILCLNY GKNKYLTDLV NNARIHLMPS 180
  181 MNPDGYEKGF PGDRISAMGR ANANDVDLNR NFPTKFESHR ETSGGSEPEK ENIAVMKWLQ 240
  241 AYPFVLSTNL HGGSLVANYP YDDSVTGQDG IYTASADDKL FVELSYRYAR AHTKMWKTGR 300
  301 RCGLSADGDN FINGITNGAG WYHLAGGMQD WQYEHTNCLE ITIEMGCFKF PTDDMMPKLW 360
  361 EEHQFSLLSF LEMGLSGVTG LVTDRNNNTV ANATISVDTG KDIISTEAGE YWRLLPPGDH 420
  421 QITVSARGLE SDTFTVTIVP GARAARHDIT LLACGDNETK SEMYIRGRGK NLIAVLSFDD 480
  481 IGGKAVDELA RLTCTGDFVI DKDVSLMLIP NMTGELKGRL TDFDPAAVLI ISKGIVETAT 540
  541 FSVSENEPKL FDKAKMDESL LKALGNSIQC ERTLLESKTA MRVDDLQLKK AFELGISIGC 600
  601 DDTNVEKKAA TIGTIADMIK NELIKDSVSE FSVVPSAHPG DHFTPDQMIH VTSAAVAELE 660
  661 RKECVQEVTR GPSKFYLMGS GKPPYTLIAA VEKRTEAMAY EMMSTYCNPD TKSEFSDILD 720
  721 ESTLVFMPEI PHTQLNCHDY DTISPFKLLF DDAIAAVPQL DFVIILATGG MKVRYINDTL 780
  781 GIGKVIAETY RTNHDLMKAT DQEGCAKGFP NEKEAIRAFS WNDNASRMDK SGVDHATDNL 840
  841 DALLVQIGCC YENMASGHLY SENQRAIKTA LIERSRGVRI IGGTDGMSVS VDHMHKRLPL 900
  901 LGGRRFVPLP NGEHLVKVRT PGGQMHAQFA VVISDRTPTV EKFVGVQSSN MVIITIASIL 960
  961 MIICCTFMCR QRVTSVLNRR GFFNGMGSKG GFERIPLYKS DDEDEDEVFD LQKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle