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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tre-1
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYTVINLLA QIYCNGPILQ TVQDSHMFPD SKHFVDMSLK YDPITTLRHF DELGDRTSDM  60
   61 IILREFVTSH FNPPGSELVE WFPPDWVDFP SNFLNIHDYH HRRWALHLHR IWKDLCRKVR 120
  121 DDVKHRQDHY SLLYVPHPFI IPGGRFLEFY YWDTFWILKG LLFSEMYETA RGVIKNLGYM 180
  181 VDNHGFVPNG GRVYYLTRSQ PPLLTPMVYE YYMSTGDLDF VMEILPTLDK EYEFWIKNRQ 240
  241 EWFKDKDGVK QFPYYQYKAK LKVPRPESYR EDSELAEHLQ TEAEKIQMWS EIASAAETGW 300
  301 DFSTRWFSQN GDTMHRMDSI RTWSIIPADL NAFMCANARI LASLYEIAGD FKKVKVFEQR 360
  361 YTWAKREMRE LHWNETDGIW YDYDIELKTH SNQYYVSNAV PLYAKCYDDD DDIPHRVHDY 420
  421 LERQGLLKYT KGLPTSLAMS STQQWDKENA WPPMIHMVIE GFRTTGDIKL MKVAEKMATS 480
  481 WLTGTYQSFI RTHAMFEKYN VTPHTEETSG GGGGEYEVQT GFGWTNGVIL DLLDKYGDQF 540
  541 ASSSTASKFS FSLSNITFVV FILYIFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle