YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE30528
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKRVFNLRF ISNFSRRPTS SPKLPKLIAI TGGTSLGIAF FGKTEENKNL DSGNGQLIDG  60
   61 KPKNFDLIVR NSDELYDNYL IDNCYNILKK FENSNCSELL WRLARVVCEK GKLSKDQNQR 120
  121 KELILEAYGI VKKALDNEPK NGCFGAHKWY AILLDYVGEI EGNKSRIEKS FQVRKHLEKA 180
  181 LSIFENDPTT WHILGVWHFS FANMGYATRM VAKAIFATPP ASTYQEALHY FLKAEQISPG 240
  241 FYSTNTYYIG EVYEQLGQKA EALDAFKQSF KMPVVTSDDA VIHKKAYEKL KKYGVKDTEV 300
  301 V

Type	Start	End	Confidence
Signal Peptide	1	39	0.60
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	301	0.97