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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lgx-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLLAISVI YHITIAQQVG INVPCNKELD GLLTADPDGD ERAFMSCQGV GVGTIGFWER  60
   61 KLCPNNMVFD FINQHCKEQK KKARKQQNLS IAILNNSCAN GETCIGGSVC DLDTLRCMCP 120
  121 YGTTPKLDTL SCESSQPPFV SATVDGPAQF FNSFSGGNGN RNNQNNGFMP FGQPSELPDF 180
  181 QPNNNFKYGN NFGQNQNSNN NNNDFNWNPN FNWNNNQNNN NNNAPNKQAP MNNAGVGATT 240
  241 TPDFNPFQPN PNQQFVFNFN KNQGGQNNQN NHVNNNNHNQ NIPVLESKPK VATLGPGELC 300
  301 DSGETCGKGS ICDSVIPVCV CPAQTDLSNG ECISVPAPTS QPVQVMTPPP TLPPVQVPIQ 360
  361 TLPPQTRPPQ LPPVQITQPP IQTPVQPIFF QTTRPPMPTY ATTPATTQFI PKQIYTTPPQ 420
  421 MPKNSIKINQ MKIGGSKQAG VGVRCSLNTD CMIGAYCNGN TNPPSCQCLS THVNIEGRCE 480
  481 KVIYPGQVGC RSDLQCHAAH SGTHCIDRIC VCPEGQRAVD QTCVSASEPV TSPPGGSCSN 540
  541 LRECTGGSVC REGWCICPDP SMIVNRGICI QSGPKPTLPP RTPIPQVPLP PQLPISVHVP 600
  601 QVTITKAQPF ITEAPLAPQG KKIVPGGRCG PIDVCVGGSN CIEGFCLCPA GQQPSNSGRC 660
  661 EKFTTTSRQT TLPSTTTTQG TTTTTTAPPP TTSVFSFTIA DLLSTRRQPA FIEIPTHVPL 720
  721 TTTAIQTDDE CTAIGLICKG NTVCRNKSCQ CPETYVLHHD GCVSPEEAAR RKARGKARHE 780
  781 ATTARLYSKP GESCTQGQTC VGGSACSFRK LCECPQDKSE ISQGQCVTPR KLEVVPGASC 840
  841 NANTVCTKGS TCESGLCRCQ PGYIAVSGNC VALPMSTTPK MRVIAKPLES CENGETCEGG 900
  901 SNCDYDTGIC MCPPGQIVFN VQCMPPPTQP QITTRVTTPV KAAPVVTPKP IHSTDCEIDA 960
  961 NCGENKICVS GKCKCKPGFV DNSGTCEPLE DIDVIERPIP VSYAKHKVAT LSERMMPREQ1020
 1021 IELSNVEPVS FVTPARQESQ TQKPRIVGPP IRRPRPKNKN SGGGSGGSGG SGGSRAYKTG1080
 1081 NGNGNCPPGN EATTDGSGKL ILCNGLEPNC PPRSYCYITS GGFATEEYNC CKSCSHRAIC1140
 1141 ILVIEMLSSD IKYLSSFSIP ILIHKSARV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle