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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lgx-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLLAISVI YHITIAQQVG INVPCNKELD GLLTADPDGD ERAFMSCQGV GVGTIGFWER  60
   61 KLCPNNMVFD FINQHCKEQK KKARKQQNLS IAILNNSCAN GETCIGGSVC DLDTLRCMCP 120
  121 YGTTPKLDTL SCESSQPPFV SATVDGPAQF FNSFSGGNGN RNNQNNGFMP FGQPSELPDF 180
  181 QPNNNFKYGN NFGQNQNSNN NNNDFNWNPN FNWNNNQNNN NNNAPNKQAP MNNAGVGATT 240
  241 TPDFNPFQPN PNQQFVFNFN KNQGGQNNQN NHVNNNNHNQ NIPVLESKPK VATLAIPGAS 300
  301 CKSNEICVGG SICTLPIGIC LCPGDLEARE GECVLPAAST ISVQKVGIGA LCSDLAECDH 360
  361 GSTCVMGRCT CVSPLVQHEG KCVLRQQQKI VGPGELCDSG ETCGKGSICD SVIPVCVCPA 420
  421 QTDLSNGECI SVPAPTSQPV QVMTPPPTLP PVQVPIQTLP PQTRPPQLPP VQITQPPIQT 480
  481 PVQPIFFQTT RPPMPTYATT PATTQFIPKQ IYTTPPQMPK NSIKINQMKI GGSKQAGVGV 540
  541 RCSLNTDCMI GAYCNGNTNP PSCQCLSTHV NIEGRCEKVI YPGQVGCRSD LQCHAAHSGT 600
  601 HCIDRICVCP EGQRAVDQTC VSASEPVTSP PGGSCSNLRE CTGGSVCREG WCICPDPSMI 660
  661 VNRGICIQSG PKPTLPPRTP IPQVPLPPQL PISVHVPQVT ITKAQPFITE APLAPQGKKI 720
  721 VPGGRCGPID VCVGGSNCIE GFCLCPAGQQ PSNSGRCEKF TTTSRQTTLP STTTTQGTTT 780
  781 TTTAPPPTTS VFSFTIADLL STRRQPAFIE IPTHVPLTTT AIQTDDECTA IGLICKGNTV 840
  841 CRNKSCQCPE TYVLHHDGCV SPEEAARRKA RGKARHEATT ARLYSKPGES CTQGQTCVGG 900
  901 SACSFRKLCE CPQDKSEISQ GQCVTPRKLE VVPGASCNAN TVCTKGSTCE SGLCRCQPGY 960
  961 IAVSGNCVAL PMSTTPKMRV IAKPLESCEN GETCEGGSNC DYDTGICMCP PGQIVFNVQC1020
 1021 MPPPTQPQIT TRVTTPVKAA PVVTPKPIHS TDCEIDANCG ENKICVSGKC KCKPGFVDNS1080
 1081 GTCEPLEDID VIERPIPVSY AKHKVATLSE RMMPREQIEL SNVEPVSFVT PARQESQTQK1140
 1141 PRIVGPPIRR PRPKNKNSGG GSGGSGGSGG SRAYKTGNGN GNCPPGNEAT TDGSGKLILC1200
 1201 NGLEPNCPPR SYCYITSGGF ATEEYNCCKS CSHRAICILV IEMLSSDIKY LSSFSIPILI1260
 1261 HKSARAIEIN KQSIGTTPPV KANRVIQTKM QQVYTTSSTI SSTTTSPAPT QKPRIVPKDF1320
 1321 PTPPSNIFGF PDRRTTKIVP KVAAVGSACR PIDICLGESV CTNGFCHCPE NYIRQNGQCI1380
 1381 SKECKHKVAK VGETCKNGEI CAGGSICDYD RKRCICAAQH VAIRGICKQK SAPAFAAPGD1440
 1441 TCSMREKCTG GATCFEGMCT CDDHHFAEDG YCRPIEARSS KVQFVNGAGL RKTSSGCLRP1500
 1501 DETPQFVVLT FDDAVNGKTF SDYKKLFEND VLKSFKFKIK NFKKVIPNTL SLKNTINPNG1560
 1561 CDVKATFFIS HEWTNYDAVN WLVQKNMEIA SNSISHESLE NANTNRWLNE MDGQRRILAK1620
 1621 FGGAPEEEIV GIRSPQLALG GDNQFEMMIG AEFLWDNSMS ANPGIHGEPF WPQTMDYQVA1680
 1681 WDCNEASCPK SSFPGVWSVP LNQFYGSYMS QIDSFRRSSM LRAAVDLNNT VDELEEIITR1740
 1741 NFERSYSANR APYVLSLNAD FLQLGGHNKG MKAVQKFLNR MSAQKDVYIV TIKQLIDWMK1800
 1801 RPVPISEMKS VRGKSKAVGC PITLSFNRNP SLSTCDIPNK CLYSTPSLSS QEHQFLTCLP1860
 1861 CPTMYPWLEN PAGGIV

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