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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE29712
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWAFDQYLN SNLQMRQLSI FAAAVILISA DAKNVLNPKG PPCPDGDGLY AVGCSSKYLQ  60
   61 CVNNVEYEQS CPEGLYFDRL LARCERRSSN HLCATGDRVT LNVRQKAVSI NCVGRLSGDY 120
  121 ALDKTVCNEN YYQCANGISY MRKCPYQQVY VPILKRCDYH TNCNASGGVK DQAAAAYASP 180
  181 TYDSDNYIVT TKEFENGHNG LDCKVTGDMH FTDNVKCSPY FWQCSNGKLF RKTCPEKLIY 240
  241 VLDQNLCDFP ESVKDCPEYN GSETSYRAPK TTTSSSSYGS IAEAPVDPTP YAPASAPVYS 300
  301 PPRTTYVPRS TSAAPPNPPP QNPTAAPYVP TEATPSPVFS STVRYNPAVH GDCKNRDGIF 360
  361 GIKECHASFL SCDNGVGRVI QCADNLVFDT RVSACEFAAI CLEPRKPEDV PVLYNHGGAY 420
  421 NERPAEVKVD FDCTGKPNGK YIKEACTKSF FTCHDGRAFA NDCPGDLVFN KATGTCDFAE 480
  481 NCEKNYMEPS QIYKGEDTPT TTIGYSSSVV YTTTEQPATK PYTQPPRDTE RPSTIYGRPI 540
  541 YTKAPTTVGY EQPKATYTTQ APVTTTIALD DFSCKHLADG NHASGLCKSV FYICANGQVV 600
  601 ATTCPANLIF NPYVGECDYS TNVRDCQGYQ PTTTPSYSYP KTTSKPYEQP STTQGYAPIE 660
  661 YTPVTPGYAP QYTSTIFTTT LSPKYAAMCA KRDDGNYGFD CEKYLIKCYN RKTFKFPCPS 720
  721 GLYYSRLQDK CDVKENVEGC PEYKPTTDAT PAAEQPVISY QNYGYSQSTT KAYNPSVTTP 780
  781 SPQHAAFCER LENGNYGLDC EDYYISCNNF ETTINRCPAG LFYSKLNNRC DYKEHVEDCP 840
  841 EYKPTPSTTP AAEQPGTTKY TTYNYPNIDY TSTTPGPVDT TPLAKAFSCS GRPDGIYALP 900
  901 YCSQDYVQCM QGRSLISSCA PGLFYNEKNG MCAYKHTVDT CKIGKGSDII DSNACFGKSD 960
  961 GYYSAGCSSY YFSCIDEQIR KMSCPNSLKF SKESEKCVFP IDAKECSIAT TLDRTPPAVP1020
 1021 SDFCTIRSNG LHHLKMCSPH YIVCDNGRAF SGTCIAPLVY NGDTQTCNYK STNKDCGNDY1080
 1081 IPPVAEVTSS YTTYTTKRFE QPAPTTTAAP YQPQTTTTGK VLYKAAYTTT ATQYEEPATT1140
 1141 PSRDVETPTT TTHKPYETTT EAQDATTTTT ASYVAPTTSS AYKSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle