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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE30432
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVFAVLALV VASVLADTLP SVTLCPPETQ TIFVLQHNTT VGARIRTIPT SNLAECSDHC  60
   61 SASLDCQGVE FKDGSCAVFR AGSEKATAGS QLLTKTCVKS DRVCQSPFQF DLFEQRILVG 120
  121 FAREVVPAAN IQICMAACLN AFDTFGFECE SAMFYPVDQE CILNTEDRLD RPSLFVEESD 180
  181 DTVIYMDNNC AGFPLVFKNY NYQKTTFSKS QCYPPYITQY IAVEGKQLKN ELDRIINVDL 240
  241 DSCQALCTQR LSISSNDFNC KSFMYNNKTR TCILADERSK PLGRADLIAT EGFTYFEKKC 300
  301 FASPNTCRNV PSFKRVPQMI LVGFAAFVME NVPSVTMCLD QCTNPPPETG DGFVCKSVMY 360
  361 YYNEQECILN SETRESKPEL FIPEGEEFLV DYFDITCHLK QEKCPTGQHL KAIRTINAAL 420
  421 PEGESELHVL KASAAKGIKE CVAKCFGLAP EKCRSFNYDK KTKSCDLLYL DGHNTLQPQV 480
  481 RQGVDLYDLH CLAAMPLVEN DCSANKDDAL FSRYLHTKQR GIPAKVYKVV SLNSCLEVCA 540
  541 GNPTCAGANY NRRLGDCTLF DAIDDDAEIN EHTDFYKNLC VTKEIDTGAS AAANVPETKH 600
  601 RVSGTVVEGK DSKSQLLATK KVKKPTIKNT EHRRAPESTV PIGPPVEVKA EAIQTICNYE 660
  661 GIKVQINNGE PFSGVIFVKN KFDTCRVEVA NSNAATLVLG LPKDFGMRPI SLDNIDDNET 720
  721 GKNKTKKGEE TPLKDEIEEF RQKRQAAEFR DCGLVDLLNG TYKSTVVIQT NNLGIPGLVT 780
  781 SMDQLYEVSC DYSSMLGGRV QAGYNMTVTG PEANLIQPRG KIELGNPVLM QLLNGDGTEQ 840
  841 PLVQAKLGDI LELRWEIMAM DDELDFFVKN CHAEPGVAGG KAGAGEKLRL IDGGCPTPAV 900
  901 AQKLIPGAIE IKSSAVKTTK MQAFRFDSSA SIRVTCEVEI CKGDCEPVEC ALTGGVKKSF 960
  961 GRKKREVSNN IEEFETNRYL IPRRSHATTS IVIIDPLQQV NEPVAMSRAS TLDLLREDAH1020
 1021 EVQMIEEGSI CLNSVTVFAI FGTLAVLILG QTVVIAHYAV RRFSSEKTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle