YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE30371
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRNFGREFL EETSIFENKT CLIWRDREIS FKEFHEYIGK WKNVLDEQKT KTTNPLRIAL  60
   61 FCTNSPDILA IIVAGQLSGV TVIPLNPSYK KYEIDEYISK SIANFIIVSD DVDLDKFEER 120
  121 EVNLISELFT SNVTPSSTAS TPENQGVIVF FSSGTTGPPK QFEYTQRILC SQIDQIKAIR 180
  181 SDPRFFSPST DDICYGVLPF FHAGGLITIL SMIFSGCTVL INERWNEHEF LANCQNYKVS 240
  241 VLFLVPPVLN FFANHPLVSS YDLSALKTIY VGAAASPPEN FAKVAERLPE LENLIQCKFS 300
  301 YNVSFFIRRK CCT

Type	Start	End	Confidence
Non-Cytoplasmic	1	197	0.75
Transmembrane Helix	198	221	0.64
Cytoplasmic	222	313	0.47