YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE30618
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEIRWGILE NKWRYYKPLA FSSSNFLVEF LIFIHVYLLA AWLALREAWF DRGFHIYKLK  60
   61 NELFSSRLWT HKSKNRRKML VIGADGTIGK RIIEILQTNT DFECHVVVHH HASPIQPFQN 120
  121 DLNTVIYSVD LKHHEQILLL ANQLKSHQFD VAIFAAGIML APESRTKDGV ELHNAVNVIG 180
  181 QVMLYELLQN ECKRAIFLSS ATARMACYSL DSNFLKVYAG PYQAYASSKL NLAVYVNEVA 240
  241 KKRRVNTVSL HPGTVPGRLY QNANPIVRYL NATLLPKLMR TPEMAAVLVL HTIFRDDIQP 300
  301 GAYYEDTQIV NVPEWVPARE RERIYDTIHR RIDLWMEC

Type	Start	End	Confidence
Cytoplasmic	1	20	0.83
Transmembrane Helix	21	44	0.88
Non-Cytoplasmic	45	338	0.89